tokens
sequence
folded_tokens
sequence
tags
sequence
labels
sequence
[ "TREB7", "and", "TREB36", "protected", "all", "three", "repeats", "of", "the", "21", "bp", ",", "but", "TREB5", "protected", "only", "the", "second", "repeat", "." ]
[ "treb7", "and", "treb36", "protect", "all", "three", "repeat", "of", "the", "21", "bp", ",", "but", "treb5", "protect", "only", "the", "second", "repeat", "." ]
[ 7, 30, 7, 21, 2, 39, 35, 20, 2, 39, 7, 16, 30, 7, 21, 26, 2, 8, 7, 15 ]
[ 0, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2 ]
[ "Analysis", "of", "various", "deletion", "mutants", "indicates", "that", "the", "sequence", "requirements", "for", "binding", "by", "QBP", "in", "vitro", "are", "indistinguishable", "from", "those", "necessary", "for", "Q", "activity", "in", "vivo", ",", "strongly", "suggesting", "that", "QBP", "is", "required", "for", "the", "function", "of", "this", "TATA", "independent", "promoter", "." ]
[ "analysis", "of", "various", "deletion", "mutant", "indicate", "that", "the", "sequence", "requirement", "for", "binding", "by", "qbp", "in", "vitro", "be", "indistinguishable", "from", "those", "necessary", "for", "Q", "activity", "in", "vivo", ",", "strongly", "suggest", "that", "qbp", "be", "require", "for", "the", "function", "of", "this", "ta", "independent", "promoter", "." ]
[ 7, 20, 8, 7, 35, 9, 20, 2, 7, 35, 20, 7, 20, 7, 11, 11, 10, 8, 20, 2, 8, 20, 36, 7, 11, 11, 16, 26, 14, 20, 7, 9, 28, 20, 2, 7, 20, 2, 7, 8, 7, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "Since", "general", "regulatory", "factor", "I", "(", "GRFI", ")", "/", "repressor", "/", "activator", "site", "binding", "protein", "1", "(", "RAP1", ")", "/", "translation", "upstream", "factor", "(", "TUF", ")", "is", "believed", "to", "be", "an", "activator", "of", "MAT", "alpha", "expression", ",", "we", "examined", "whether", "PYK1", ",", "which", "is", "known", "to", "be", "regulated", "by", "GRFI", "/", "RAP1/TUF", ",", "is", "also", "affected", "by", "the", "gal11", "mutation", "." ]
[ "since", "general", "regulatory", "factor", "I", "(", "grfus", ")", "/", "repressor", "/", "activator", "site", "binding", "protein", "1", "(", "rap1", ")", "/", "translation", "upstream", "factor", "(", "tuf", ")", "be", "believe", "to", "be", "a", "activator", "of", "mat", "alpha", "expression", ",", "we", "examine", "whether", "pyk1", ",", "which", "be", "know", "to", "be", "regulate", "by", "GRFI", "/", "rap1/tuf", ",", "be", "also", "affect", "by", "the", "gal11", "mutation", "." ]
[ 20, 8, 8, 7, 18, 10, 7, 39, 40, 7, 40, 7, 7, 7, 7, 39, 39, 7, 39, 40, 7, 8, 7, 39, 7, 7, 9, 28, 24, 22, 2, 7, 20, 7, 7, 7, 16, 18, 21, 20, 7, 16, 33, 9, 28, 24, 22, 28, 20, 36, 40, 7, 16, 9, 26, 28, 20, 2, 7, 7, 15 ]
[ 2, 0, 1, 1, 1, 2, 0, 2, 2, 0, 1, 1, 1, 1, 1, 1, 2, 0, 2, 2, 0, 1, 1, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 0, 2, 2, 2, 2, 2, 2, 0, 1, 2 ]
[ "Yeast", "Gal11", "protein", "mediates", "the", "transcriptional", "activation", "signal", "of", "two", "different", "transacting", "factors", ",", "Gal4", "and", "general", "regulatory", "factor", "I", "/", "repressor/activator", "site", "binding", "protein", "1", "/", "translation", "upstream", "factor", "." ]
[ "yeast", "gal11", "protein", "mediate", "the", "transcriptional", "activation", "signal", "of", "two", "different", "transact", "factor", ",", "gal4", "and", "general", "regulatory", "factor", "I", "/", "repressor/activator", "site", "binding", "protein", "1", "/", "translation", "upstream", "factor", "." ]
[ 7, 7, 7, 9, 2, 8, 7, 7, 20, 39, 8, 14, 35, 16, 7, 30, 8, 8, 7, 18, 40, 7, 7, 7, 7, 39, 40, 7, 8, 7, 15 ]
[ 0, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 0, 1, 1, 1, 2, 0, 1, 1, 1, 1, 0, 1, 1, 1, 2 ]
[ "Deletion", "from", "either", "the", "N-", "or", "C-terminal", "ends", "of", "repA", "(", "28", "and", "69", "codons", ",", "respectively", ",", "out", "of", "the", "286-codon", "open", "reading", "frame", ")", "affected", "the", "initiator", "but", "not", "the", "inhibitory", "activity", "." ]
[ "deletion", "from", "either", "the", "n-_NN", "or", "c-terminal", "end", "of", "repa", "(", "28", "and", "69", "codon", ",", "respectively", ",", "out", "of", "the", "286-codon", "open", "reading", "frame", ")", "affect", "the", "initiator", "but", "not", "the", "inhibitory", "activity", "." ]
[ 7, 20, 30, 2, 7, 30, 8, 35, 20, 7, 39, 39, 30, 39, 35, 16, 26, 16, 20, 20, 2, 8, 8, 7, 7, 39, 21, 2, 7, 30, 26, 2, 8, 7, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "In", "vitro", "transcription", "extracts", "from", "ret1-1", "cells", "terminate", "less", "efficiently", "at", "weak", "transcription", "termination", "signals", "than", "those", "from", "RET1", "cells", ",", "using", "a", "variety", "of", "tRNA", "templates", "." ]
[ "in", "vitro", "transcription", "extract", "from", "ret1-1", "cell", "terminate", "less", "efficiently", "at", "weak", "transcription", "termination", "signal", "than", "those", "from", "ret1", "cell", ",", "use", "a", "variety", "of", "trna", "template", "." ]
[ 11, 11, 7, 35, 20, 7, 35, 10, 12, 26, 20, 8, 7, 7, 35, 20, 2, 20, 7, 35, 16, 14, 2, 7, 20, 7, 35, 15 ]
[ 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "IgG", "and", "IgM", "antibody", "activity", "was", "determined", "by", "adding", "a", "1:100", "dilution", "of", "serum", "to", "plates", "coated", "with", "A60", "antigen", "." ]
[ "igg", "and", "igm", "antibody", "activity", "be", "determine", "by", "add", "a", "1:100", "dilution", "of", "serum", "to", "plate", "coat", "with", "a60", "antigen", "." ]
[ 7, 30, 7, 7, 7, 21, 28, 20, 14, 2, 39, 7, 20, 7, 24, 35, 28, 20, 7, 7, 15 ]
[ 0, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 2 ]
[ "These", "factors", "belong", "to", "a", "set", "of", "genetically", "distinct", "molecules", ",", "including", "AP-4", "and", "MLTF", ",", "that", "bind", "to", "the", "CACCTGTC", "motif", "or", "related", "sequences", "." ]
[ "these", "factor", "belong", "to", "a", "set", "of", "genetically", "distinct", "molecule", ",", "include", "ap-4", "and", "mltf", ",", "that", "bind", "to", "the", "cacctgtc", "motif", "or", "related", "sequence", "." ]
[ 2, 35, 10, 24, 2, 7, 20, 26, 8, 35, 16, 14, 7, 30, 7, 16, 33, 10, 24, 2, 7, 7, 30, 8, 35, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "Here", ",", "we", "have", "used", "specific", "antibody", "to", "identify", "and", "characterize", "the", "SSN6", "protein", "." ]
[ "here", ",", "we", "have", "use", "specific", "antibody", "to", "identify", "and", "characterize", "the", "ssn6", "protein", "." ]
[ 26, 16, 18, 10, 28, 8, 7, 24, 22, 30, 22, 2, 7, 7, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 2 ]
[ "These", "latter", "results", "showed", "that", "the", "ABFI", "protein", ",", "like", "the", "RAP1", "protein", ",", "bound", "sequences", "required", "for", "positive", "as", "well", "as", "negative", "regulation", "of", "gene", "expression", "." ]
[ "these", "latter", "result", "show", "that", "the", "abfus", "protein", ",", "like", "the", "rap1", "protein", ",", "bind", "sequence", "require", "for", "positive", "as", "well", "as", "negative", "regulation", "of", "gene", "expression", "." ]
[ 2, 8, 35, 21, 20, 2, 7, 7, 16, 20, 2, 7, 7, 16, 21, 35, 28, 20, 8, 26, 26, 20, 8, 7, 20, 7, 7, 15 ]
[ 2, 2, 2, 2, 2, 2, 0, 1, 2, 2, 2, 0, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "RNase", "protection", "assays", "reveal", "that", "this", "gene", ",", "unr", ",", "is", "transcribed", "in", "the", "same", "direction", "as", "N-ras", "and", "that", "its", "3", "'", "end", "is", "located", "just", "130", "base", "pairs", "away", "from", "the", "point", "at", "which", "N-ras", "transcription", "begins", "." ]
[ "rnase", "protection", "assay", "reveal", "that", "this", "gene", ",", "unr", ",", "be", "transcribe", "in", "the", "same", "direction", "as", "n-ra", "and", "that", "its", "3", "'", "end", "be", "located", "just", "130", "base", "pair", "away", "from", "the", "point", "at", "which", "n-ras", "transcription", "begin", "." ]
[ 7, 7, 35, 10, 20, 2, 7, 16, 7, 16, 9, 28, 20, 2, 8, 7, 20, 7, 30, 20, 17, 39, 3, 7, 9, 8, 26, 39, 7, 35, 26, 20, 2, 7, 20, 33, 8, 7, 9, 15 ]
[ 0, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2 ]
[ "Isolation", "of", "a", "temperature", "sensitive", "mutant", "with", "an", "altered", "tRNA", "nucleotidyltransferase", "and", "cloning", "of", "the", "gene", "encoding", "tRNA", "nucleotidyltransferase", "in", "the", "yeast", "Saccharomyces", "cerevisiae", "." ]
[ "isolation", "of", "a", "temperature", "sensitive", "mutant", "with", "a", "altered", "trna", "nucleotidyltransferase", "and", "cloning", "of", "the", "gene", "encode", "trna", "nucleotidyltransferase", "in", "the", "yeast", "saccharomyces", "cerevisiae", "." ]
[ 7, 20, 2, 7, 8, 7, 20, 2, 8, 7, 7, 30, 7, 20, 2, 7, 14, 7, 7, 20, 2, 7, 11, 11, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 2 ]
[ "The", "juxtamembrane", "region", "of", "the", "insulin", "receptor", "(", "IR", ")", "beta-subunit", "contains", "an", "unphosphorylated", "tyrosyl", "residue", "(", "Tyr960", ")", "that", "is", "essential", "for", "insulin", "stimulated", "tyrosyl", "phosphorylation", "of", "some", "endogenous", "substrates", "and", "certain", "biological", "responses", "(", "White", ",", "M.F.", ",", "Livingston", ",", "J.N.", ",", "Backer", ",", "J.M.", ",", "Lauris", ",", "V.", ",", "Dull", ",", "T.J.", ",", "Ullrich", ",", "A.", ",", "and", "Kahn", ",", "C.R." ]
[ "the", "juxtamembrane", "region", "of", "the", "insulin", "receptor", "(", "ir", ")", "beta-subunit", "contain", "a", "unphosphorylated", "tyrosyl", "residue", "(", "tyr960", ")", "that", "be", "essential", "for", "insulin", "stimulate", "tyrosyl", "phosphorylation", "of", "some", "endogenous", "substrate", "and", "certain", "biological", "response", "(", "White", ",", "M.F.", ",", "Livingston", ",", "J.N.", ",", "Backer", ",", "J.M.", ",", "Lauris", ",", "V.", ",", "Dull", ",", "T.J.", ",", "Ullrich", ",", "a.", ",", "and", "Kahn", ",", "C.R." ]
[ 2, 7, 7, 20, 2, 7, 7, 39, 7, 39, 7, 9, 2, 8, 7, 7, 39, 7, 7, 33, 9, 8, 20, 7, 28, 7, 7, 20, 2, 8, 35, 30, 8, 8, 35, 10, 36, 16, 36, 16, 36, 16, 36, 16, 36, 16, 36, 16, 36, 16, 36, 16, 36, 16, 36, 16, 36, 16, 7, 16, 30, 36, 16, 36 ]
[ 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
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[ 2, 7, 9, 2, 7, 20, 35, 23, 35, 10, 26, 28, 20, 7, 24, 7, 30, 8, 35, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2 ]
[ "The", "3", "'", "region", ",", "GA2", ",", "is", "necessary", "for", "maximal", "expression", "." ]
[ "the", "3", "'", "region", ",", "ga2", ",", "be", "necessary", "for", "maximal", "expression", "." ]
[ 2, 39, 3, 7, 16, 7, 16, 9, 8, 20, 8, 7, 15 ]
[ 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2 ]
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[ 8, 7, 7, 8, 7, 7, 7, 9, 28, 20, 39, 35, 39, 7, 30, 7, 39, 1, 21, 17, 8, 35, 20, 2, 35, 20, 39, 40, 39, 30, 39, 40, 39, 35, 26, 15 ]
[ 2, 0, 1, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "The", "urinary", "protein", ",", "serum", "albumin", ",", "BUN", "and", "SCr", "all", "had", "very", "significant", "improvement", "." ]
[ "the", "urinary", "protein", ",", "serum", "albumin", ",", "bun", "and", "scr", "all", "have", "very", "significant", "improvement", "." ]
[ 2, 8, 7, 16, 7, 7, 16, 7, 30, 7, 2, 21, 26, 8, 7, 15 ]
[ 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "More", "generally", ",", "Ets1", "and", "Ets2", "could", "regulate", "transcription", "of", "cellular", "genes", "." ]
[ "more", "generally", ",", "ets1", "and", "ets2", "could", "regulate", "transcription", "of", "cellular", "gene", "." ]
[ 12, 26, 16, 7, 30, 7, 13, 22, 7, 20, 8, 35, 15 ]
[ 2, 2, 2, 0, 2, 0, 2, 2, 2, 2, 2, 2, 2 ]
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[ 20, 2, 7, 2, 36, 7, 21, 28, 20, 2, 8, 8, 7, 7, 14, 20, 2, 7, 20, 39, 7, 35, 30, 39, 7, 8, 7, 15 ]
[ 2, 2, 2, 2, 0, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "Horseradish", "peroxidase", "as", "a", "permeability", "marker", "in", "injured", "rat", "caudal", "and", "iliac", "arteries", "." ]
[ "horseradish", "peroxidase", "as", "a", "permeability", "marker", "in", "injured", "rat", "caudal", "and", "iliac", "artery", "." ]
[ 8, 7, 20, 2, 7, 7, 20, 8, 7, 7, 30, 7, 35, 15 ]
[ 0, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
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[ 2, 7, 20, 2, 35, 20, 35, 30, 7, 20, 2, 7, 20, 8, 35 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2 ]
[ "On", "an", "antithrombin", "unit", "basis", ",", "CY", "216", "and", "CY", "222", "were", "equivalent", "and", "more", "potent", "than", "UH", "." ]
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[ 20, 2, 7, 7, 7, 16, 7, 39, 30, 7, 39, 21, 8, 30, 12, 8, 20, 36, 15 ]
[ 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "Chick", "brain", "actin", "depolymerizing", "factor", "(", "ADF", ")", "is", "a", "19-kDa", "protein", "that", "severs", "actin", "filaments", "and", "binds", "actin", "monomers", "." ]
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[ 7, 7, 7, 7, 7, 39, 7, 7, 9, 2, 8, 7, 33, 9, 7, 35, 30, 9, 7, 35, 15 ]
[ 0, 1, 1, 1, 1, 2, 0, 2, 2, 2, 2, 2, 2, 2, 0, 1, 2, 2, 0, 1, 2 ]
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[ 7, 7, 7, 30, 7, 7, 9, 20, 2, 7, 7, 7, 20, 7, 7, 7, 9, 8, 39, 35, 26, 20, 2, 7, 7, 20, 2, 7, 7, 15 ]
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[ 36, 35, 14, 2, 8, 7, 16, 7, 39, 8, 8, 7, 30, 7, 35, 21, 26, 28, 20, 7, 35, 20, 7, 7, 39, 7, 7, 16, 7, 39, 7, 7, 39, 7, 16, 30, 8, 7, 7, 15 ]
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[ 35, 20, 8, 7, 7, 35, 21, 26, 41, 7, 7, 35, 28, 24, 2, 20, 8, 35, 10, 39, 30, 39, 39, 7 ]
[ 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
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