Datasets:
enoriega
/
biocreative_gene_mention

Dataset card Data Studio Files Community
tokens
sequence
folded_tokens
sequence
tags
sequence
labels
sequence
[ "Krox-24", "is", "therefore", "a", "sequence", "specific", "transcriptional", "activator", "." ]
[ "krox-24", "be", "therefore", "a", "sequence", "specific", "transcriptional", "activator", "." ]
[ 7, 9, 26, 2, 7, 8, 8, 7, 15 ]
[ 0, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "Expression", ",", "nucleotide", "sequence", "and", "mutational", "analysis", "of", "two", "open", "reading", "frames", "in", "the", "nif", "gene", "region", "of", "Anabaena", "sp", ".", "strain", "PCC7120", "." ]
[ "expression", ",", "nucleotide", "sequence", "and", "mutational", "analysis", "of", "two", "open", "reading", "frame", "in", "the", "nif", "gene", "region", "of", "Anabaena", "sp", ".", "strain", "pcc7120", "." ]
[ 7, 16, 7, 7, 30, 8, 7, 20, 39, 8, 7, 35, 20, 2, 7, 7, 7, 20, 36, 7, 15, 7, 7, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 2 ]
[ "Further", ",", "they", "are", "consistent", "with", "the", "suggestion", "that", "sites", "homologous", "to", "the", "CAR1", "URS", "may", "be", "situated", "in", "the", "5", "'", "-", "flanking", "regions", "of", "multiple", "unrelated", "yeast", "genes", "." ]
[ "further", ",", "they", "be", "consistent", "with", "the", "suggestion", "that", "site", "homologous", "to", "the", "car1", "ur", "may", "be", "situate", "in", "the", "5", "'", "-", "flanking", "region", "of", "multiple", "unrelated", "yeast", "gene", "." ]
[ 26, 16, 18, 10, 8, 20, 2, 7, 33, 35, 8, 24, 2, 7, 7, 13, 22, 28, 20, 2, 39, 3, 40, 8, 35, 20, 8, 8, 7, 35, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "This", "Mr", "is", "similar", "to", "those", "of", "the", "purified", "smg", "p25A", "GDI", "estimated", "by", "sodium", "dodecyl", "sulfate-polyacrylamide", "gel", "electrophoresis", "and", "sucrose", "density", "gradient", "ultracentrifugation", ",", "which", "are", "about", "54,000", "and", "65,000", ",", "respectively", "." ]
[ "this", "mr", "be", "similar", "to", "those", "of", "the", "purify", "smg", "p25a", "gdus", "estimate", "by", "sodium", "dodecyl", "sulfate-polyacrylamide", "gel", "electrophoresis", "and", "sucrose", "density", "gradient", "ultracentrifugation", ",", "which", "be", "about", "54,000", "and", "65,000", ",", "respectively", "." ]
[ 2, 7, 9, 8, 24, 2, 20, 2, 28, 7, 7, 7, 28, 20, 7, 7, 8, 7, 7, 30, 7, 7, 7, 7, 16, 33, 10, 20, 39, 30, 39, 16, 26, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "Yeast", "mutants", "assigned", "to", "the", "pet", "complementation", "group", "G104", "were", "found", "to", "lack", "alpha-ketoglutarate", "dehydrogenase", "activity", "as", "a", "result", "of", "mutations", "in", "the", "dihydrolipoyl", "transsuccinylase", "(", "KE2", ")", "component", "of", "the", "complex", "." ]
[ "yeast", "mutant", "assign", "to", "the", "pet", "complementation", "group", "g104", "be", "find", "to", "lack", "alpha-ketoglutarate", "dehydrogenase", "activity", "as", "a", "result", "of", "mutation", "in", "the", "dihydrolipoyl", "transsuccinylase", "(", "ke2", ")", "component", "of", "the", "complex", "." ]
[ 7, 35, 28, 24, 2, 7, 7, 7, 7, 21, 28, 24, 22, 8, 7, 7, 20, 2, 7, 20, 35, 20, 2, 7, 7, 39, 7, 39, 7, 20, 2, 7, 15 ]
[ 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 0, 1, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 2, 0, 2, 2, 2, 2, 2, 2 ]
[ "Critical", "residues", "required", "for", "repression", "are", "located", "within", "the", "C-terminal", "27", "amino", "acids", "of", "c-Fos", ",", "since", "v-Fos", "and", "C-terminal", "truncations", "of", "c-Fos", "did", "not", "down", "regulate", "." ]
[ "critical", "residue", "require", "for", "repression", "be", "located", "within", "the", "c-terminal", "27", "amino", "acid", "of", "c-fo", ",", "since", "v-fo", "and", "c-terminal", "truncation", "of", "c-fo", "do", "not", "down", "regulate", "." ]
[ 8, 35, 28, 20, 7, 10, 8, 20, 2, 8, 39, 7, 35, 20, 7, 16, 20, 7, 30, 8, 35, 20, 7, 21, 26, 26, 22, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 0, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2 ]
[ "We", "also", "discovered", "a", "V", "lambda", "pseudogene", ",", "called", "psi", "V", "lambda", "1", ",", "3", "kb", "upstream", "of", "the", "U266", "lambda", "gene", "." ]
[ "we", "also", "discover", "a", "v", "lambda", "pseudogene", ",", "call", "psus", "v", "lambda", "1", ",", "3", "kb", "upstream", "of", "the", "u266", "lambda", "gene", "." ]
[ 18, 26, 21, 2, 7, 7, 7, 16, 28, 7, 7, 7, 39, 16, 39, 7, 26, 20, 2, 7, 7, 7, 15 ]
[ 2, 2, 2, 2, 0, 1, 1, 2, 2, 0, 1, 1, 1, 2, 2, 2, 2, 2, 2, 0, 1, 1, 2 ]
[ "In", "this", "paper", ",", "we", "have", "analyzed", "the", "structure", "of", "human", "gene", "for", "Gx", "alpha", ",", "which", "spans", "more", "than", "60", "kilobases", "." ]
[ "in", "this", "paper", ",", "we", "have", "analyze", "the", "structure", "of", "human", "gene", "for", "gx", "alpha", ",", "which", "span", "more", "than", "60", "kilobase", "." ]
[ 20, 2, 7, 16, 18, 10, 28, 2, 7, 20, 8, 7, 20, 7, 7, 16, 33, 9, 41, 20, 39, 35, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "A", "long", "follow-up", "study", "revealed", "that", "convalescent", "stage", "children", "still", "have", "the", "potency", "to", "have", "an", "immediate", "type", "hypersensitivity", "reaction", "on", "exposure", "to", "mite", "antigen", ",", "with", "a", "high", "titer", "of", "mite", "specific", "IgE", "in", "their", "sera", ",", "but", "they", "are", "free", "from", "asthmatic", "attacks", "because", "of", "the", "reduction", "in", "the", "amount", "of", "mite", "antigen", "in", "the", "body", ",", "as", "shown", "by", "the", "reduction", "in", "the", "amount", "of", "mite", "specific", "IgG", "." ]
[ "a", "long", "follow-up", "study", "reveal", "that", "convalescent", "stage", "child", "still", "have", "the", "potency", "to", "have", "a", "immediate", "type", "hypersensitivity", "reaction", "on", "exposure", "to", "mite", "antigen", ",", "with", "a", "high", "titer", "of", "mite", "specific", "ige", "in", "they", "serum", ",", "but", "they", "be", "free", "from", "asthmatic", "attack", "because", "of", "the", "reduction", "in", "the", "amount", "of", "mite", "antigen", "in", "the", "body", ",", "as", "show", "by", "the", "reduction", "in", "the", "amount", "of", "mite", "specific", "igg", "." ]
[ 2, 8, 8, 7, 21, 20, 8, 7, 35, 26, 10, 2, 7, 24, 22, 2, 8, 7, 7, 7, 20, 7, 24, 8, 7, 16, 20, 2, 8, 7, 20, 8, 8, 7, 20, 17, 35, 16, 30, 18, 10, 8, 20, 8, 35, 20, 20, 2, 7, 20, 2, 7, 20, 8, 7, 20, 2, 7, 16, 20, 28, 20, 2, 7, 20, 2, 7, 20, 8, 8, 7, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 2 ]
[ "Uses", "of", "orthoclone", "OKT3", "for", "prophylaxis", "of", "rejection", "and", "induction", "in", "initial", "nonfunction", "in", "kidney", "transplantation", "." ]
[ "use", "of", "orthoclone", "okt3", "for", "prophylaxis", "of", "rejection", "and", "induction", "in", "initial", "nonfunction", "in", "kidney", "transplantation", "." ]
[ 9, 20, 7, 7, 20, 7, 20, 7, 30, 7, 20, 8, 7, 20, 7, 7, 15 ]
[ 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "Furthermore", ",", "we", "notice", "two", "potential", "consensus", "motifs", "which", "are", "also", "found", "in", "corresponding", "positions", "in", "the", "genes", "for", "the", "nerve", "growth", "factor", "receptor", "and", "the", "68-kDa", "neurofilament", "protein", "." ]
[ "furthermore", ",", "we", "notice", "two", "potential", "consensus", "motif", "which", "be", "also", "find", "in", "corresponding", "position", "in", "the", "gene", "for", "the", "nerve", "growth", "factor", "receptor", "and", "the", "68-kda", "neurofilament", "protein", "." ]
[ 26, 16, 18, 10, 39, 8, 7, 35, 33, 10, 26, 28, 20, 8, 35, 20, 2, 35, 20, 2, 7, 7, 7, 7, 30, 2, 8, 7, 7, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 2, 2, 0, 1, 1, 2 ]
[ "In", "addition", ",", "the", "-119", "to", "-81", "fragment", "of", "the", "CCK", "promoter", "contains", "a", "transcriptional", "enhancer", "that", "potentiates", "the", "transcription", "from", "the", "herpes", "simplex", "virus", "thymidine", "kinase", "promoter", "in", "a", "position-", "and", "orientation", "independent", "manner", "." ]
[ "in", "addition", ",", "the", "-119", "to", "-81", "fragment", "of", "the", "cck", "promoter", "contain", "a", "transcriptional", "enhancer", "that", "potentiate", "the", "transcription", "from", "the", "herpes", "simplex", "virus", "thymidine", "kinase", "promoter", "in", "a", "position-_NN", "and", "orientation", "independent", "manner", "." ]
[ 20, 7, 16, 2, 39, 24, 39, 7, 20, 2, 7, 7, 9, 2, 8, 7, 33, 9, 2, 7, 20, 2, 7, 7, 7, 7, 7, 7, 20, 2, 7, 30, 7, 8, 7, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "Gel-mobility-shift", "assays", "confirmed", "that", "the", "Raji", "nuclear", "proteins", "that", "bound", "to", "W", "and", "V", "elements", "were", "competed", "with", "by", "an", "HLA-DRA", "X-box", "oligonucleotide", "." ]
[ "gel-mobility-shift", "assay", "confirm", "that", "the", "rajus", "nuclear", "protein", "that", "bind", "to", "W", "and", "V", "element", "be", "compete", "with", "by", "a", "hla-dra", "x-box", "oligonucleotide", "." ]
[ 8, 35, 21, 20, 2, 7, 8, 35, 33, 21, 24, 36, 30, 36, 35, 21, 28, 20, 20, 2, 7, 7, 7, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 2 ]
[ "The", "NF1", "locus", "encodes", "a", "protein", "functionally", "related", "to", "mammalian", "GAP", "and", "yeast", "IRA", "proteins", "." ]
[ "the", "nf1", "locus", "encode", "a", "protein", "functionally", "related", "to", "mammalian", "gap", "and", "yeast", "IRA", "protein", "." ]
[ 2, 7, 7, 9, 2, 7, 26, 8, 24, 8, 7, 30, 7, 36, 35, 15 ]
[ 2, 0, 1, 2, 2, 2, 2, 2, 2, 0, 1, 2, 0, 1, 1, 2 ]
[ "Hence", ",", "the", "replacement", "of", "Phe-62", "with", "Ser", "specifically", "affects", "a", "determinant", "on", "the", "lambda", "I", "light", "chain", "that", "is", "necessary", "for", "the", "intracellular", "transport", "of", "this", "molecule", "." ]
[ "hence", ",", "the", "replacement", "of", "phe-62", "with", "ser", "specifically", "affect", "a", "determinant", "on", "the", "lambda", "I", "light", "chain", "that", "be", "necessary", "for", "the", "intracellular", "transport", "of", "this", "molecule", "." ]
[ 26, 16, 2, 7, 20, 7, 20, 7, 26, 9, 2, 7, 20, 2, 7, 18, 8, 7, 33, 9, 8, 20, 2, 8, 7, 20, 2, 7, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "A", "second", "isotype", "of", "Raja", "immunoglobulin", "heavy", "chain", "genes", "has", "been", "detected", "by", "screening", "a", "spleen", "cDNA", "library", "with", "homologous", "Raja", "VH-", "and", "CH1", "specific", "probes", "complementing", "the", "respective", "regions", "of", "the", "mu", "like", "isotype", "." ]
[ "a", "second", "isotype", "of", "Raja", "immunoglobulin", "heavy", "chain", "gene", "have", "be", "detect", "by", "screen", "a", "spleen", "cdna", "library", "with", "homologous", "Raja", "VH-", "and", "ch1", "specific", "probe", "complement", "the", "respective", "region", "of", "the", "mu", "like", "isotype", "." ]
[ 2, 8, 7, 20, 36, 7, 8, 7, 35, 9, 28, 28, 20, 14, 2, 7, 7, 7, 20, 8, 36, 36, 30, 7, 8, 35, 14, 2, 8, 35, 20, 2, 7, 20, 7, 15 ]
[ 2, 2, 2, 2, 0, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 2 ]
[ "Disruption", "of", "ARF2", "causes", "no", "detectable", "phenotype", "." ]
[ "disruption", "of", "arf2", "cause", "no", "detectable", "phenotype", "." ]
[ 7, 20, 7, 9, 2, 8, 7, 15 ]
[ 2, 2, 0, 2, 2, 2, 2, 2 ]
[ "Human", "recombinant", "DNA", "derived", "antihemophilic", "factor", "(", "factor", "VIII", ")", "in", "the", "treatment", "of", "hemophilia", "A.", "recombinant", "Factor", "VIII", "Study", "Group", "." ]
[ "human", "recombinant", "dna", "derive", "antihemophilic", "factor", "(", "factor", "viii", ")", "in", "the", "treatment", "of", "hemophilia", "a.", "recombinant", "factor", "viii", "Study", "Group", "." ]
[ 8, 8, 7, 28, 8, 7, 7, 7, 39, 7, 20, 2, 7, 20, 7, 7, 8, 7, 39, 36, 36, 15 ]
[ 2, 2, 2, 2, 0, 1, 2, 0, 1, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 2, 2, 2 ]
[ "Like", "other", "members", "of", "this", "family", ",", "the", "AP-4", "HLH", "motif", "and", "the", "adjacent", "basic", "domain", "are", "necessary", "and", "sufficient", "to", "confer", "site", "specific", "DNA", "binding", "." ]
[ "like", "other", "member", "of", "this", "family", ",", "the", "ap-4", "hlh", "motif", "and", "the", "adjacent", "basic", "domain", "be", "necessary", "and", "sufficient", "to", "confer", "site", "specific", "dna", "binding", "." ]
[ 20, 8, 35, 20, 2, 7, 16, 2, 7, 8, 7, 30, 2, 8, 8, 7, 10, 8, 30, 8, 24, 22, 7, 8, 7, 7, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "Furthermore", ",", "expression", "of", "the", "promoter", "in", "embryonic", "Drosophila", "melanogaster", "cells", "that", "lack", "MyoD1", "and", "Sp1", "is", "strictly", "dependent", "on", "all", "three", "sites", "remaining", "intact", "and", "on", "the", "presence", "of", "exogenously", "supplied", "Sp1", "and", "MyoD1", "." ]
[ "furthermore", ",", "expression", "of", "the", "promoter", "in", "embryonic", "drosophila", "melanogaster", "cell", "that", "lack", "myod1", "and", "sp1", "be", "strictly", "dependent", "on", "all", "three", "site", "remain", "intact", "and", "on", "the", "presence", "of", "exogenously", "supply", "sp1", "and", "myod1", "." ]
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[ "Effects", "of", "a", "selective", "monoamine", "oxidase", "(", "MAO", ")", "--", "A", "inhibitor", ",", "clorgyline", ",", "a", "selective", "MAO-B", "inhibitor", ",", "deprenyl", ",", "and", "a", "non", "selective", "MAO", "inhibitor", ",", "nialamide", ",", "were", "investigated", "on", "footshock", "induced", "aggression", "(", "FIA", ")", "in", "paired", "rats", "." ]
[ "effect", "of", "a", "selective", "monoamine", "oxidase", "(", "MAO", ")", "--", "a", "inhibitor", ",", "clorgyline", ",", "a", "selective", "mao-b", "inhibitor", ",", "deprenyl", ",", "and", "a", "non", "selective", "MAO", "inhibitor", ",", "nialamide", ",", "be", "investigate", "on", "footshock", "induce", "aggression", "(", "fium", ")", "in", "paired", "rat", "." ]
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[ "To", "identify", "structural", "features", "of", "residues", "flanking", "the", "c-region", "that", "influence", "the", "fidelity", "and", "efficiency", "of", "signal", "peptidase", "cleavage", "as", "well", "as", "co-translational", "translocation", ",", "we", "introduced", "six", "amino", "acid", "substitutions", "into", "the", "COOH", "terminus", "of", "the", "hydrophobic", "core", "and", "seven", "substitutions", "at", "the", "NH2", "terminus", "of", "the", "mature", "region", "(", "the", "+1", "position", ")", "of", "a", "model", "eukaryotic", "preprotein-human", "pre", "(", "delta", "pro", ")", "apoA-II", "." ]
[ "to", "identify", "structural", "feature", "of", "residue", "flank", "the", "c-region", "that", "influence", "the", "fidelity", "and", "efficiency", "of", "signal", "peptidase", "cleavage", "as", "well", "as", "co-translational", "translocation", ",", "we", "introduce", "six", "amino", "acid", "substitution", "into", "the", "cooh", "terminus", "of", "the", "hydrophobic", "core", "and", "seven", "substitution", "at", "the", "nh2", "terminus", "of", "the", "mature", "region", "(", "the", "+1", "position", ")", "of", "a", "model", "eukaryotic", "preprotein-human", "pre", "(", "delta", "pro", ")", "apoa-ii", "." ]
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[ "Additionally", ",", "although", "c-fos", "and", "egr-1", "mRNAs", "are", "expressed", "at", "elevated", "levels", "in", "stimulated", "liver", "cells", ",", "fos-B", ",", "fra-1", ",", "and", "egr-2", "are", "not", ",", "which", "suggests", "that", "factors", "in", "addition", "to", "the", "serum", "response", "factor", "participate", "in", "the", "regulation", "of", "immediate-early", "gene", "induction", "." ]
[ "additionally", ",", "although", "c-fo", "and", "egr-1", "mrna", "be", "express", "at", "elevated", "level", "in", "stimulate", "liver", "cell", ",", "fos-b", ",", "fra-1", ",", "and", "egr-2", "be", "not", ",", "which", "suggest", "that", "factor", "in", "addition", "to", "the", "serum", "response", "factor", "participate", "in", "the", "regulation", "of", "immediate-early", "gene", "induction", "." ]
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