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adata.h5ad

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lightning_logs/version_0/events.out.tfevents.1733433912.Yoseflab-R13B.329818.25

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lightning_logs/version_0/hparams.yaml

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lightning_logs/version_1/events.out.tfevents.1733434445.Yoseflab-R13B.337477.0

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lightning_logs/version_1/hparams.yaml

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lightning_logs/version_2/events.out.tfevents.1733434470.Yoseflab-R13B.337477.1

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lightning_logs/version_2/hparams.yaml

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metrics.json

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 {
-    "cell_wise_cv": "| Metric                  | Training Value | Validation Value |\n|-------------------------|----------------|------------------|\n| Mean Absolute Error | 2.41  | 2.31           |\n| Pearson Correlation | 0.46  | 0.43  |\n| Spearman Correlation | 0.34 | 0.37  |\n| R\u00b2 (R-Squared) | -0.25  | -0.32      |",
-    "gene_wise_cv": "| Metric                  | Training Value |\n|-------------------------|----------------|\n| Mean Absolute Error | 8.86   |\n| Pearson Correlation | 0.53  |\n| Spearman Correlation | 0.54 |\n| R\u00b2 (R-Squared) | -1.31  |",
-    "diff_exp": "| Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |\n| --- | --- | --- | --- | --- | --- | --- | --- |\n| macrophage | 0.90 | 1.29 | 0.55 | 0.92 | 0.27 | 0.76 | 1379.00 |\n| monocyte | 0.83 | 2.14 | 0.55 | 0.82 | 0.25 | 0.68 | 605.00 |\n| endothelial cell of hepatic sinusoid | 0.73 | 1.91 | 0.61 | 0.88 | 0.54 | 0.81 | 341.00 |\n| mature NK T cell | 0.80 | 3.16 | 0.57 | 0.85 | 0.48 | 0.83 | 231.00 |\n| neutrophil | 0.38 | 4.44 | 0.43 | 0.67 | 0.21 | 0.52 | 81.00 |\n| fibroblast | 0.69 | 2.92 | 0.63 | 0.81 | 0.54 | 0.77 | 70.00 |\n| hepatocyte | 0.66 | 4.54 | 0.59 | 0.82 | 0.41 | 0.82 | 67.00 |\n| liver dendritic cell | 0.46 | 5.48 | 0.52 | 0.44 | 0.35 | 0.47 | 34.00 |\n| T cell | 0.42 | 8.60 | 0.36 | 0.47 | 0.32 | 0.48 | 20.00 |\n| plasma cell | 0.45 | 7.03 | 0.49 | 0.45 | 0.34 | 0.55 | 19.00 |\n| intrahepatic cholangiocyte | 0.51 | 5.22 | 0.61 | 0.73 | 0.40 | 0.58 | 11.00 |\n| erythrocyte | 0.23 | 9.99 | 0.29 | 0.23 | 0.26 | 0.81 | 2.00 |"
+    "cell_wise_cv": "| Metric                  | Training Value | Validation Value |\n|-------------------------|----------------|------------------|\n| Mean Absolute Error | 2.28  | 2.45           |\n| Pearson Correlation | 0.46  | 0.36  |\n| Spearman Correlation | 0.40 | 0.27  |\n| R\u00b2 (R-Squared) | -0.35  | -0.49      |",
+    "gene_wise_cv": "| Metric                  | Training Value |\n|-------------------------|----------------|\n| Mean Absolute Error | 8.84   |\n| Pearson Correlation | 0.54  |\n| Spearman Correlation | 0.54 |\n| R\u00b2 (R-Squared) | -1.36  |",
+    "diff_exp": "| Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |\n| --- | --- | --- | --- | --- | --- | --- | --- |\n| macrophage | 0.91 | 1.32 | 0.54 | 0.92 | 0.27 | 0.76 | 1379.00 |\n| monocyte | 0.85 | 2.17 | 0.55 | 0.83 | 0.25 | 0.68 | 605.00 |\n| endothelial cell of hepatic sinusoid | 0.74 | 1.88 | 0.63 | 0.87 | 0.55 | 0.82 | 341.00 |\n| mature NK T cell | 0.80 | 3.23 | 0.55 | 0.84 | 0.48 | 0.83 | 231.00 |\n| neutrophil | 0.37 | 4.49 | 0.42 | 0.67 | 0.21 | 0.52 | 81.00 |\n| fibroblast | 0.67 | 2.83 | 0.64 | 0.83 | 0.54 | 0.77 | 70.00 |\n| hepatocyte | 0.68 | 4.37 | 0.61 | 0.82 | 0.41 | 0.82 | 67.00 |\n| liver dendritic cell | 0.44 | 5.47 | 0.52 | 0.46 | 0.35 | 0.47 | 34.00 |\n| T cell | 0.46 | 8.49 | 0.37 | 0.46 | 0.32 | 0.48 | 20.00 |\n| plasma cell | 0.50 | 7.16 | 0.47 | 0.44 | 0.34 | 0.56 | 19.00 |\n| intrahepatic cholangiocyte | 0.52 | 5.43 | 0.59 | 0.73 | 0.40 | 0.57 | 11.00 |\n| erythrocyte | 0.19 | 10.19 | 0.26 | 0.19 | 0.27 | 0.81 | 2.00 |"
 }

model.pt

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