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Han Chen

hchen725

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hchen725

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Recent Activity

updated a model 2 days ago

ctheodoris/Geneformer

new activity 2 days ago

ctheodoris/Geneformer:Prepare data cell level pass cell state dict instead of genes

new activity 13 days ago

ctheodoris/Geneformer:Fix how mappings and train and val data are returned

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hchen725's activity

New activity in ctheodoris/Geneformer 2 days ago

Prepare data cell level pass cell state dict instead of genes

#483 opened 2 days ago by

New activity in ctheodoris/Geneformer 13 days ago

Fix how mappings and train and val data are returned

#473 opened 13 days ago by

New activity in ctheodoris/Geneformer 29 days ago

Upload gene_name_id_dict_gc95M.pkl

#470 opened 29 days ago by

New activity in ctheodoris/Geneformer 2 months ago

Add checks for custom attributes and n_counts prior to sum ensembl id

#461 opened 2 months ago by

New activity in ctheodoris/Geneformer 3 months ago

Update geneformer/emb_extractor.py

#453 opened 3 months ago by

Update geneformer/tokenizer.py

#450 opened 3 months ago by

New activity in ctheodoris/Geneformer 5 months ago

Update trainer output dir

#427 opened 5 months ago by

Update geneformer/tokenizer.py

#415 opened 5 months ago by

New activity in ctheodoris/Geneformer 6 months ago

Remove circular import from .data

#381 opened 6 months ago by

Add function for summing of Ensembl IDs

#377 opened 6 months ago by

New activity in ctheodoris/Geneformer 7 months ago

Add function to get number of model embeddings

#364 opened 7 months ago by

embs_df with all model embeddings

#363 opened 7 months ago by

Update geneformer/perturber_utils.py

#362 opened 7 months ago by

Update geneformer/perturber_utils.py

#361 opened 7 months ago by

New activity in ctheodoris/Geneformer 8 months ago

Update geneformer/emb_extractor.py

#356 opened 8 months ago by

Update geneformer/in_silico_perturber.py

#355 opened 8 months ago by

Update geneformer/perturber_utils.py

#353 opened 8 months ago by

Update geneformer/perturber_utils.py

#354 opened 8 months ago by

Update geneformer/emb_extractor.py

#352 opened 8 months ago by

Update geneformer/emb_extractor.py

#350 opened 8 months ago by