### A Pluto.jl notebook ###
# v0.17.0

using Markdown
using InteractiveUtils

# This Pluto notebook uses @bind for interactivity. When running this notebook outside of Pluto, the following 'mock version' of @bind gives bound variables a default value (instead of an error).
macro bind(def, element)
    quote
        local el = $(esc(element))
        global $(esc(def)) = Core.applicable(Base.get, el) ? Base.get(el) : missing
        el
    end
end

# ╔═╡ 747d446a-dfeb-11ea-3533-c9404fd41688
begin
	using IndividualDisplacements, MeshArrays, DataFrames, OceanStateEstimation
	using Statistics, PlutoUI, OrdinaryDiffEq, StatsPlots, NetCDF
	✓ = "😃"
	"$✓ Set up packages"
end

# ╔═╡ bf19d29c-e70e-11ea-0153-d3a49981d56c
md"""longitude,latitude of South West corner =
$(@bind lon0 NumberField(-180.0:10:180.0; default=0.0))
,
$(@bind lat0 NumberField(-90.0:5:90.0; default=-50.0))
"""

# ╔═╡ 4935fd46-e70f-11ea-386c-f9c444a20644
md"""depth level (integer), set size (nb of particles) =
$(@bind klev NumberField(1:10; default=5))
,
$(@bind npar NumberField(50:50:1000; default=100))
""" 

# ╔═╡ 9c80e722-e70f-11ea-22a6-0be2e85f3b8b
md"""time step (for plotting)= 
$(@bind tt Slider(1:26; default=13, show_value=true))
"""

# ╔═╡ e25eee9e-dfee-11ea-2a4c-3946ccb63876
begin
	lo0=lon0; lo1=lo0+5
	la0=lat0; la1=la0+5
	z_init=klev
	n_part=npar
	(particles=n_part,longitudes=(lo0,lo1),latitudes=(la0,la1),level=z_init,plot_time=tt)
end

# ╔═╡ 87c5e5d4-c343-49fb-bc7e-6b2c0e647a38
function OCCA_FlowFields(;backward_in_time::Bool=false,nmax=Inf)

   γ=GridSpec("PeriodicChannel",MeshArrays.GRID_LL360)
   Γ=GridLoad(γ;option="full")
   n=length(Γ.RC)
   isfinite(nmax) ? n=min(n,Int(nmax)) : nothing

   g=Γ.XC.grid
   func=(u -> IndividualDisplacements.update_location_dpdo!(u,g))

   jj=[:hFacC, :hFacW, :hFacS, :DXG, :DYG, :RAC, :RAZ, :RAS]
   ii=findall([!in(i,jj) for i in keys(Γ)])
   Γ=(; zip(Symbol.(keys(Γ)[ii]), values(Γ)[ii])...)

   backward_in_time ? s=-1.0 : s=1.0
   s=Float32(s)

   function rd(filename, varname,n)
   fil = NetCDF.open(filename, varname)
   siz = size(fil)
   tmp = zeros(siz[1:2]...,n)
   [tmp .+= fil[:,:,1:n,t] for t=1:12]
   tmp ./= 12.0
   tmp[findall(tmp.<-1e22)] .= 0.0
   return tmp
   end

   fileIn=OCCAclim_path*"DDuvel.0406clim.nc"
   u=s*read(rd(fileIn,"u",n),MeshArray(γ,Float32,n))

   fileIn=OCCAclim_path*"DDvvel.0406clim.nc"
   v=s*read(rd(fileIn,"v",n),MeshArray(γ,Float32,n))

   fileIn=OCCAclim_path*"DDwvel.0406clim.nc"
   w=s*rd(fileIn,"w",n)
   w=-cat(w,zeros(360, 160),dims=3)
   w[:,:,1] .=0.0
   w=read(w,MeshArray(γ,Float32,n+1))

   fileIn=OCCAclim_path*"DDtheta.0406clim.nc"
   θ=read(rd(fileIn,"theta",n),MeshArray(γ,Float32,n))

#   fileIn=OCCAclim_path*"DDsalt.0406clim.nc"
#   𝑆=read(rd(fileIn,"salt",n),MeshArray(γ,Float64,n))

   for i in eachindex(u)
      u[i]=u[i]./Γ.DXC[1]
      v[i]=v[i]./Γ.DYC[1]
   end

   for i in eachindex(u)
      u[i]=circshift(u[i],[-180 0])
      v[i]=circshift(v[i],[-180 0])
      θ[i]=circshift(θ[i],[-180 0])
#      𝑆[i]=circshift(𝑆[i],[-180 0])
   end

   for i in eachindex(w)
      w[i]=w[i]./Γ.DRC[min(i[2]+1,n)]
      w[i]=circshift(w[i],[-180 0])
   end

   tmpx=circshift(Γ.XC[1],[-180 0])
   tmpx[1:180,:]=tmpx[1:180,:] .- 360.0
   Γ.XC[1]=tmpx

   tmpx=circshift(Γ.XG[1],[-180 0])
   tmpx[1:180,:]=tmpx[1:180,:] .- 360.0
   Γ.XG[1]=tmpx
   Γ.Depth[1]=circshift(Γ.Depth[1],[-180 0])

   t0=0.0; t1=86400*366*2.0;

   for k=1:n
    (tmpu,tmpv)=exchange(u[:,k],v[:,k],1)
    u[:,k]=tmpu
    v[:,k]=tmpv
   end
   for k=1:n+1
    tmpw=exchange(w[:,k],1)
    w[:,k]=tmpw
   end

   𝑃=FlowFields(u,u,v,v,w,w,[t0,t1],func)

   𝐷 = (θ0=θ, θ1=θ, XC=exchange(Γ.XC), YC=exchange(Γ.YC), 
   RF=Γ.RF, RC=Γ.RC,ioSize=(360,160,n))

   return 𝑃,𝐷,Γ

end

# ╔═╡ 1811955d-618d-49e3-9f81-63195e2632fe
begin
	𝑃,𝐷,Γ=OCCA_FlowFields(nmax=5)
	tmp=(Γ = Γ, m = "OCCA")
    𝐷=merge(𝐷,tmp)
	"$✓ Set up gridded domain"
end

# ╔═╡ f75fae30-dfee-11ea-18ef-259321acfa2f
begin	
	lon=lo0 .+(lo1-lo0).*rand(n_part)
	lat=la0 .+(la1-la0).*rand(n_part)
	(_,_,_,_,f,x,y)=InterpolationFactors(𝐷.Γ,lon,lat)
    m=findall( (f.!==0).*((!isnan).(x)) )
	df=DataFrame(x=x[m],y=y[m],f=f[m])
	
	custom🔴 = DataFrame(ID=Int[], fid=Int[], x=Float32[], y=Float32[], 
		z=Float32[], year=Float32[], t=Float32[])
	function custom🔧(sol,𝐹::𝐹_MeshArray3D;id=missing,𝑇=missing)
		df=postprocess_MeshArray(sol,𝐹,id=id,𝑇=𝑇)
		z=[sol[1,i,j][3] for i in 1:size(sol,2), j in 1:size(sol,3)]
		df.z=z[:]
		df.year=df.t ./86400/365
		return df
	end
	custom∫(prob) = solve(prob,Tsit5(),reltol=1e-8,abstol=1e-8,saveat=365/12*86400.0)
	
	𝐼=Individuals(𝑃,df.x,df.y,fill(z_init,n_part),df.f,
		(🔴=custom🔴,🔧=custom🔧,∫=custom∫))

	"$✓ Set up Individuals"
end

# ╔═╡ 9ffe84c0-dff0-11ea-2726-8924892df73a
begin
	𝑇=(0.0,𝐼.𝑃.𝑇[2])
	∫!(𝐼,𝑇)
	
	add_lonlat!(𝐼.🔴,𝐷.XC,𝐷.YC)
	
	🔴_by_ID = groupby(𝐼.🔴, :ID)
	🔴_by_t = groupby(𝐼.🔴, :t)
	
	ff(x) = x[1]
	tmp1=combine(🔴_by_ID,:lon => ff => :lo,:lat => ff => :la)
	𝐼.🔴.dlon=𝐼.🔴.lon - tmp1.lo[𝐼.🔴.ID]
	𝐼.🔴.dlat=𝐼.🔴.lat - tmp1.la[𝐼.🔴.ID]
	
	nt=length(unique(𝐼.🔴.t))

	"$✓ ∫!(𝐼,𝑇) etc"
end

# ╔═╡ f65ddffa-e63a-11ea-34a6-2fa9284e98fa
begin
	mx=20.0

	#f(x)=x[tt]-x[1]
	#f(x)=last(x).-first(x)
	#cdf = combine(🔴_by_ID,nrow,:lat => f => :dlat,:lon => f => :dlon)

	g(x)=x[tt]
	cdf = combine(🔴_by_ID,:dlat => g => :dlat,:dlon => g => :dlon)
	
	plt_hist=histogram2d(cdf.dlon,cdf.dlat,nbins = (10, 10),colorbar=false)
	#scatter(cdf.dlon,cdf.dlat,xlims=(-mx,mx),ylims=(-mx,mx))
	"$✓ dlon, dlat histogram2d"
end

# ╔═╡ 7d52252e-e006-11ea-2632-df2af831b52f
begin
	xx=vec(𝐷.Γ.XC[1][:,1])
	yy=vec(𝐷.Γ.YC[1][1,:])
	zz=transpose(log10.(𝐷.Γ.Depth[1]))
	𝐵=(x = xx, y = yy, z = zz)
	
	𝐶(g::ColorGradient) = RGB[g[z] for z=LinRange(0,1,length(🔴_by_t))]
	𝐶(t::Int) = 𝐶(cgrad(:inferno))[t]	
	"$✓ Set up plotting"
end

# ╔═╡ 0b12cf52-e6e3-11ea-1a01-dd0c49c9e641
begin
	plt_dlat = @df 🔴_by_t[1] density(:dlat, leg = :none, colour = 𝐶(1), ylims=(0,0.5))
	[@df 🔴_by_t[tt] density!(plt_dlat,:dlat, leg = :none, colour = 𝐶(tt)) for tt in 2:length(🔴_by_t)];
	density!(plt_dlat,🔴_by_t[tt].dlat, leg = :none, colour = :cyan, linewidth=4)
	"$✓ dlat density"
end

# ╔═╡ 6f70033a-e6cc-11ea-373e-6dcbaaa53d15
begin
	#clims=extrema(:t)
	#@df 𝐼.🔴 density(:lon, group = (:t), leg = :none, palette = cgrad(:ice))
	plt_dlon = @df 🔴_by_t[1] density(:dlon, leg = :none, colour = 𝐶(1), ylims=(0,0.5))
	[@df 🔴_by_t[tt] density!(plt_dlon,:dlon, leg = :none, colour = 𝐶(tt)) for tt in 2:length(🔴_by_t)];
	density!(plt_dlon,🔴_by_t[tt].dlon, leg = :none, colour = :cyan, linewidth=4)
	"$✓ dlon density"
end

# ╔═╡ a13d6ea6-dff1-11ea-0713-cb235e28cf79
begin
	plt_map=contourf(xx,yy,zz,clims=(-.5,4.),c = :ice, 
		colorbar=false, xlims=(-180.0,180.0),ylims=(-90.0,90.0))
	scatter!(plt_map,🔴_by_t[1].lon,🔴_by_t[1].lat,c=:gold,leg=:none,
		markersize=2.0, marker = (:dot, stroke(0)) )
	scatter!(plt_map,🔴_by_t[tt].lon,🔴_by_t[tt].lat,c=:red,leg=:none,
		markersize=2.0, marker = (:dot, stroke(0)) )
	
	plot(plt_map,plt_hist,plt_dlon,plt_dlat)
end

# ╔═╡ 00000000-0000-0000-0000-000000000001
PLUTO_PROJECT_TOML_CONTENTS = """
[deps]
DataFrames = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0"
IndividualDisplacements = "b92f0c32-5b7e-11e9-1d7b-238b2da8b0e6"
MeshArrays = "cb8c808f-1acf-59a3-9d2b-6e38d009f683"
NetCDF = "30363a11-5582-574a-97bb-aa9a979735b9"
OceanStateEstimation = "891f6deb-a4f5-4bc5-a2e3-1e8f649cdd2c"
OrdinaryDiffEq = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed"
PlutoUI = "7f904dfe-b85e-4ff6-b463-dae2292396a8"
Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
StatsPlots = "f3b207a7-027a-5e70-b257-86293d7955fd"

[compat]
DataFrames = "~1.2.2"
IndividualDisplacements = "~0.3.3"
MeshArrays = "~0.2.26"
NetCDF = "~0.11.3"
OceanStateEstimation = "~0.1.15"
OrdinaryDiffEq = "~5.66.1"
PlutoUI = "~0.7.18"
StatsPlots = "~0.14.28"
"""

# ╔═╡ 00000000-0000-0000-0000-000000000002
PLUTO_MANIFEST_TOML_CONTENTS = """
# This file is machine-generated - editing it directly is not advised

[[AWS]]
deps = ["Base64", "Compat", "Dates", "Downloads", "GitHub", "HTTP", "IniFile", "JSON", "MbedTLS", "Mocking", "OrderedCollections", "Retry", "Sockets", "URIs", "UUIDs", "XMLDict"]
git-tree-sha1 = "5052fc28bdd6f2501e86b8d063cfe7c82a094a36"
uuid = "fbe9abb3-538b-5e4e-ba9e-bc94f4f92ebc"
version = "1.70.0"

[[AbstractFFTs]]
deps = ["LinearAlgebra"]
git-tree-sha1 = "485ee0867925449198280d4af84bdb46a2a404d0"
uuid = "621f4979-c628-5d54-868e-fcf4e3e8185c"
version = "1.0.1"

[[AbstractPlutoDingetjes]]
deps = ["Pkg"]
git-tree-sha1 = "0ec322186e078db08ea3e7da5b8b2885c099b393"
uuid = "6e696c72-6542-2067-7265-42206c756150"
version = "1.1.0"

[[Adapt]]
deps = ["LinearAlgebra"]
git-tree-sha1 = "84918055d15b3114ede17ac6a7182f68870c16f7"
uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e"
version = "3.3.1"

[[ArgTools]]
uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f"

[[ArnoldiMethod]]
deps = ["LinearAlgebra", "Random", "StaticArrays"]
git-tree-sha1 = "f87e559f87a45bece9c9ed97458d3afe98b1ebb9"
uuid = "ec485272-7323-5ecc-a04f-4719b315124d"
version = "0.1.0"

[[Arpack]]
deps = ["Arpack_jll", "Libdl", "LinearAlgebra"]
git-tree-sha1 = "2ff92b71ba1747c5fdd541f8fc87736d82f40ec9"
uuid = "7d9fca2a-8960-54d3-9f78-7d1dccf2cb97"
version = "0.4.0"

[[Arpack_jll]]
deps = ["Libdl", "OpenBLAS_jll", "Pkg"]
git-tree-sha1 = "e214a9b9bd1b4e1b4f15b22c0994862b66af7ff7"
uuid = "68821587-b530-5797-8361-c406ea357684"
version = "3.5.0+3"

[[ArrayInterface]]
deps = ["Compat", "IfElse", "LinearAlgebra", "Requires", "SparseArrays", "Static"]
git-tree-sha1 = "e527b258413e0c6d4f66ade574744c94edef81f8"
uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9"
version = "3.1.40"

[[Artifacts]]
uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33"

[[AxisAlgorithms]]
deps = ["LinearAlgebra", "Random", "SparseArrays", "WoodburyMatrices"]
git-tree-sha1 = "66771c8d21c8ff5e3a93379480a2307ac36863f7"
uuid = "13072b0f-2c55-5437-9ae7-d433b7a33950"
version = "1.0.1"

[[Base64]]
uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f"

[[BitTwiddlingConvenienceFunctions]]
deps = ["Static"]
git-tree-sha1 = "bc1317f71de8dce26ea67fcdf7eccc0d0693b75b"
uuid = "62783981-4cbd-42fc-bca8-16325de8dc4b"
version = "0.1.1"

[[Blosc]]
deps = ["Blosc_jll"]
git-tree-sha1 = "217da19d6f3a94753e580a8bc241c7cbefd9281f"
uuid = "a74b3585-a348-5f62-a45c-50e91977d574"
version = "0.7.1"

[[Blosc_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Lz4_jll", "Pkg", "Zlib_jll", "Zstd_jll"]
git-tree-sha1 = "e747dac84f39c62aff6956651ec359686490134e"
uuid = "0b7ba130-8d10-5ba8-a3d6-c5182647fed9"
version = "1.21.0+0"

[[Bzip2_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "c3598e525718abcc440f69cc6d5f60dda0a1b61e"
uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0"
version = "1.0.6+5"

[[CFTime]]
deps = ["Dates", "Printf"]
git-tree-sha1 = "bca6cb6ee746e6485ca4535f6cc29cf3579a0f20"
uuid = "179af706-886a-5703-950a-314cd64e0468"
version = "0.1.1"

[[CPUSummary]]
deps = ["Hwloc", "IfElse", "Static"]
git-tree-sha1 = "87b0c9c6ee0124d6c1f4ce8cb035dcaf9f90b803"
uuid = "2a0fbf3d-bb9c-48f3-b0a9-814d99fd7ab9"
version = "0.1.6"

[[CSV]]
deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "SentinelArrays", "Tables", "Unicode", "WeakRefStrings"]
git-tree-sha1 = "74147e877531d7c172f70b492995bc2b5ca3a843"
uuid = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b"
version = "0.9.10"

[[Cairo_jll]]
deps = ["Artifacts", "Bzip2_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"]
git-tree-sha1 = "e2f47f6d8337369411569fd45ae5753ca10394c6"
uuid = "83423d85-b0ee-5818-9007-b63ccbeb887a"
version = "1.16.0+6"

[[CatViews]]
deps = ["Random", "Test"]
git-tree-sha1 = "23d1f1e10d4e24374112fcf800ac981d14a54b24"
uuid = "81a5f4ea-a946-549a-aa7e-2a7f63a27d31"
version = "1.0.0"

[[ChainRulesCore]]
deps = ["Compat", "LinearAlgebra", "SparseArrays"]
git-tree-sha1 = "f885e7e7c124f8c92650d61b9477b9ac2ee607dd"
uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
version = "1.11.1"

[[ClimateModels]]
deps = ["AWS", "CFTime", "CSV", "DataFrames", "Dates", "Downloads", "Git", "NetCDF", "OrderedCollections", "Pkg", "Statistics", "Suppressor", "TOML", "Test", "UUIDs", "Zarr"]
git-tree-sha1 = "15ba5b736e675d5e79fe5ad0e7a8f67a286ffe31"
uuid = "f6adb021-9183-4f40-84dc-8cea6f651bb0"
version = "0.1.20"

[[CloseOpenIntervals]]
deps = ["ArrayInterface", "Static"]
git-tree-sha1 = "7b8f09d58294dc8aa13d91a8544b37c8a1dcbc06"
uuid = "fb6a15b2-703c-40df-9091-08a04967cfa9"
version = "0.1.4"

[[Clustering]]
deps = ["Distances", "LinearAlgebra", "NearestNeighbors", "Printf", "SparseArrays", "Statistics", "StatsBase"]
git-tree-sha1 = "75479b7df4167267d75294d14b58244695beb2ac"
uuid = "aaaa29a8-35af-508c-8bc3-b662a17a0fe5"
version = "0.14.2"

[[CodecZlib]]
deps = ["TranscodingStreams", "Zlib_jll"]
git-tree-sha1 = "ded953804d019afa9a3f98981d99b33e3db7b6da"
uuid = "944b1d66-785c-5afd-91f1-9de20f533193"
version = "0.7.0"

[[ColorSchemes]]
deps = ["ColorTypes", "Colors", "FixedPointNumbers", "Random"]
git-tree-sha1 = "a851fec56cb73cfdf43762999ec72eff5b86882a"
uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4"
version = "3.15.0"

[[ColorTypes]]
deps = ["FixedPointNumbers", "Random"]
git-tree-sha1 = "024fe24d83e4a5bf5fc80501a314ce0d1aa35597"
uuid = "3da002f7-5984-5a60-b8a6-cbb66c0b333f"
version = "0.11.0"

[[Colors]]
deps = ["ColorTypes", "FixedPointNumbers", "Reexport"]
git-tree-sha1 = "417b0ed7b8b838aa6ca0a87aadf1bb9eb111ce40"
uuid = "5ae59095-9a9b-59fe-a467-6f913c188581"
version = "0.12.8"

[[CommonSolve]]
git-tree-sha1 = "68a0743f578349ada8bc911a5cbd5a2ef6ed6d1f"
uuid = "38540f10-b2f7-11e9-35d8-d573e4eb0ff2"
version = "0.2.0"

[[CommonSubexpressions]]
deps = ["MacroTools", "Test"]
git-tree-sha1 = "7b8a93dba8af7e3b42fecabf646260105ac373f7"
uuid = "bbf7d656-a473-5ed7-a52c-81e309532950"
version = "0.3.0"

[[Compat]]
deps = ["Base64", "Dates", "DelimitedFiles", "Distributed", "InteractiveUtils", "LibGit2", "Libdl", "LinearAlgebra", "Markdown", "Mmap", "Pkg", "Printf", "REPL", "Random", "SHA", "Serialization", "SharedArrays", "Sockets", "SparseArrays", "Statistics", "Test", "UUIDs", "Unicode"]
git-tree-sha1 = "dce3e3fea680869eaa0b774b2e8343e9ff442313"
uuid = "34da2185-b29b-5c13-b0c7-acf172513d20"
version = "3.40.0"

[[CompilerSupportLibraries_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae"

[[ConstructionBase]]
deps = ["LinearAlgebra"]
git-tree-sha1 = "f74e9d5388b8620b4cee35d4c5a618dd4dc547f4"
uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9"
version = "1.3.0"

[[Contour]]
deps = ["StaticArrays"]
git-tree-sha1 = "9f02045d934dc030edad45944ea80dbd1f0ebea7"
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git-tree-sha1 = "d735490ac75c5cb9f1b00d8b5509c11984dc6943"
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[[KernelDensity]]
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[[LAME_jll]]
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git-tree-sha1 = "f6250b16881adf048549549fba48b1161acdac8c"
uuid = "c1c5ebd0-6772-5130-a774-d5fcae4a789d"
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[[LZO_jll]]
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git-tree-sha1 = "e5b909bcf985c5e2605737d2ce278ed791b89be6"
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[[LaTeXStrings]]
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[[LabelledArrays]]
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[[Latexify]]
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[[LayoutPointers]]
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[[LazyArtifacts]]
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[[LibCURL]]
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[[LibCURL_jll]]
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uuid = "deac9b47-8bc7-5906-a0fe-35ac56dc84c0"

[[LibGit2]]
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[[LibSSH2_jll]]
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uuid = "29816b5a-b9ab-546f-933c-edad1886dfa8"

[[LibVPX_jll]]
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[[Libdl]]
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[[Libffi_jll]]
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[[Libgcrypt_jll]]
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[[Libglvnd_jll]]
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[[Libgpg_error_jll]]
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uuid = "7add5ba3-2f88-524e-9cd5-f83b8a55f7b8"
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[[Libiconv_jll]]
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[[Libmount_jll]]
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[[Libtiff_jll]]
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git-tree-sha1 = "340e257aada13f95f98ee352d316c3bed37c8ab9"
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[[Libuuid_jll]]
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[[LightGraphs]]
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[[LineSearches]]
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[[LinearAlgebra]]
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[[LogExpFunctions]]
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[[Logging]]
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[[LoopVectorization]]
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[[Lz4_jll]]
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git-tree-sha1 = "5d494bc6e85c4c9b626ee0cab05daa4085486ab1"
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[[MITgcmTools]]
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[[MKL_jll]]
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uuid = "856f044c-d86e-5d09-b602-aeab76dc8ba7"
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[[MacroTools]]
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[[ManualMemory]]
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[[Markdown]]
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[[MbedTLS]]
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git-tree-sha1 = "1c38e51c3d08ef2278062ebceade0e46cefc96fe"
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[[MbedTLS_jll]]
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[[Measures]]
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[[MeshArrays]]
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[[Missings]]
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[[Mmap]]
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[[Mocking]]
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[[MozillaCACerts_jll]]
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[[MuladdMacro]]
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[[MultivariateStats]]
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[[NLSolversBase]]
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[[NLsolve]]
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[[NaNMath]]
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[[NearestNeighbors]]
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[[NetCDF]]
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[[NetCDF_jll]]
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git-tree-sha1 = "0cf4d1bf2ef45156aed85c9ac5f8c7e697d9288c"
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[[NetworkOptions]]
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[[NonlinearSolve]]
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[[Observables]]
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[[OceanStateEstimation]]
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[[OffsetArrays]]
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[[Ogg_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "7937eda4681660b4d6aeeecc2f7e1c81c8ee4e2f"
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[[OpenBLAS_jll]]
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uuid = "4536629a-c528-5b80-bd46-f80d51c5b363"

[[OpenLibm_jll]]
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uuid = "05823500-19ac-5b8b-9628-191a04bc5112"

[[OpenSSL_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "15003dcb7d8db3c6c857fda14891a539a8f2705a"
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[[OpenSpecFun_jll]]
deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "13652491f6856acfd2db29360e1bbcd4565d04f1"
uuid = "efe28fd5-8261-553b-a9e1-b2916fc3738e"
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[[Opus_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "51a08fb14ec28da2ec7a927c4337e4332c2a4720"
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[[OrderedCollections]]
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[[OrdinaryDiffEq]]
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git-tree-sha1 = "138a1578c523f7a4899dc8b31730cd6cf74c1ab0"
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[[PCRE2_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "efcefdf7-47ab-520b-bdef-62a2eaa19f15"

[[PCRE_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "b2a7af664e098055a7529ad1a900ded962bca488"
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[[PDMats]]
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[[Parameters]]
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[[Parsers]]
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[[Pixman_jll]]
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git-tree-sha1 = "b4f5d02549a10e20780a24fce72bea96b6329e29"
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[[Pkg]]
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uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f"

[[PlotThemes]]
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[[PlotUtils]]
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[[Plots]]
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[[PlutoUI]]
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[[Polyester]]
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[[PolyesterWeave]]
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[[PooledArrays]]
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[[PreallocationTools]]
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[[Preferences]]
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deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "6783737e45d3c59a4a4c4091f5f88cdcf0908cbb"
uuid = "14d82f49-176c-5ed1-bb49-ad3f5cbd8c74"
version = "0.1.0+3"

[[Xorg_libxcb_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "XSLT_jll", "Xorg_libXau_jll", "Xorg_libXdmcp_jll", "Xorg_libpthread_stubs_jll"]
git-tree-sha1 = "daf17f441228e7a3833846cd048892861cff16d6"
uuid = "c7cfdc94-dc32-55de-ac96-5a1b8d977c5b"
version = "1.13.0+3"

[[Xorg_libxkbfile_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"]
git-tree-sha1 = "926af861744212db0eb001d9e40b5d16292080b2"
uuid = "cc61e674-0454-545c-8b26-ed2c68acab7a"
version = "1.1.0+4"

[[Xorg_xcb_util_image_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xcb_util_jll"]
git-tree-sha1 = "0fab0a40349ba1cba2c1da699243396ff8e94b97"
uuid = "12413925-8142-5f55-bb0e-6d7ca50bb09b"
version = "0.4.0+1"

[[Xorg_xcb_util_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libxcb_jll"]
git-tree-sha1 = "e7fd7b2881fa2eaa72717420894d3938177862d1"
uuid = "2def613f-5ad1-5310-b15b-b15d46f528f5"
version = "0.4.0+1"

[[Xorg_xcb_util_keysyms_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xcb_util_jll"]
git-tree-sha1 = "d1151e2c45a544f32441a567d1690e701ec89b00"
uuid = "975044d2-76e6-5fbe-bf08-97ce7c6574c7"
version = "0.4.0+1"

[[Xorg_xcb_util_renderutil_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xcb_util_jll"]
git-tree-sha1 = "dfd7a8f38d4613b6a575253b3174dd991ca6183e"
uuid = "0d47668e-0667-5a69-a72c-f761630bfb7e"
version = "0.3.9+1"

[[Xorg_xcb_util_wm_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xcb_util_jll"]
git-tree-sha1 = "e78d10aab01a4a154142c5006ed44fd9e8e31b67"
uuid = "c22f9ab0-d5fe-5066-847c-f4bb1cd4e361"
version = "0.4.1+1"

[[Xorg_xkbcomp_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libxkbfile_jll"]
git-tree-sha1 = "4bcbf660f6c2e714f87e960a171b119d06ee163b"
uuid = "35661453-b289-5fab-8a00-3d9160c6a3a4"
version = "1.4.2+4"

[[Xorg_xkeyboard_config_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xkbcomp_jll"]
git-tree-sha1 = "5c8424f8a67c3f2209646d4425f3d415fee5931d"
uuid = "33bec58e-1273-512f-9401-5d533626f822"
version = "2.27.0+4"

[[Xorg_xtrans_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "79c31e7844f6ecf779705fbc12146eb190b7d845"
uuid = "c5fb5394-a638-5e4d-96e5-b29de1b5cf10"
version = "1.4.0+3"

[[Zarr]]
deps = ["AWS", "Blosc", "CodecZlib", "DataStructures", "Dates", "DiskArrays", "HTTP", "JSON", "OffsetArrays", "Pkg"]
git-tree-sha1 = "18ac3fd29790edeee42bfed5020b12ae61a029d0"
uuid = "0a941bbe-ad1d-11e8-39d9-ab76183a1d99"
version = "0.6.3"

[[Zlib_jll]]
deps = ["Libdl"]
uuid = "83775a58-1f1d-513f-b197-d71354ab007a"

[[Zstd_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "cc4bf3fdde8b7e3e9fa0351bdeedba1cf3b7f6e6"
uuid = "3161d3a3-bdf6-5164-811a-617609db77b4"
version = "1.5.0+0"

[[ZygoteRules]]
deps = ["MacroTools"]
git-tree-sha1 = "8c1a8e4dfacb1fd631745552c8db35d0deb09ea0"
uuid = "700de1a5-db45-46bc-99cf-38207098b444"
version = "0.2.2"

[[libass_jll]]
deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"]
git-tree-sha1 = "acc685bcf777b2202a904cdcb49ad34c2fa1880c"
uuid = "0ac62f75-1d6f-5e53-bd7c-93b484bb37c0"
version = "0.14.0+4"

[[libfdk_aac_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "7a5780a0d9c6864184b3a2eeeb833a0c871f00ab"
uuid = "f638f0a6-7fb0-5443-88ba-1cc74229b280"
version = "0.1.6+4"

[[libpng_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"]
git-tree-sha1 = "94d180a6d2b5e55e447e2d27a29ed04fe79eb30c"
uuid = "b53b4c65-9356-5827-b1ea-8c7a1a84506f"
version = "1.6.38+0"

[[libsodium_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "848ab3d00fe39d6fbc2a8641048f8f272af1c51e"
uuid = "a9144af2-ca23-56d9-984f-0d03f7b5ccf8"
version = "1.0.20+0"

[[libvorbis_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Ogg_jll", "Pkg"]
git-tree-sha1 = "c45f4e40e7aafe9d086379e5578947ec8b95a8fb"
uuid = "f27f6e37-5d2b-51aa-960f-b287f2bc3b7a"
version = "1.3.7+0"

[[nghttp2_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d"

[[p7zip_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "3f19e933-33d8-53b3-aaab-bd5110c3b7a0"

[[x264_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "d713c1ce4deac133e3334ee12f4adff07f81778f"
uuid = "1270edf5-f2f9-52d2-97e9-ab00b5d0237a"
version = "2020.7.14+2"

[[x265_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "487da2f8f2f0c8ee0e83f39d13037d6bbf0a45ab"
uuid = "dfaa095f-4041-5dcd-9319-2fabd8486b76"
version = "3.0.0+3"

[[xkbcommon_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Wayland_jll", "Wayland_protocols_jll", "Xorg_libxcb_jll", "Xorg_xkeyboard_config_jll"]
git-tree-sha1 = "ece2350174195bb31de1a63bea3a41ae1aa593b6"
uuid = "d8fb68d0-12a3-5cfd-a85a-d49703b185fd"
version = "0.9.1+5"
"""

# ╔═╡ Cell order:
# ╟─bf19d29c-e70e-11ea-0153-d3a49981d56c
# ╟─4935fd46-e70f-11ea-386c-f9c444a20644
# ╟─9c80e722-e70f-11ea-22a6-0be2e85f3b8b
# ╟─e25eee9e-dfee-11ea-2a4c-3946ccb63876
# ╟─a13d6ea6-dff1-11ea-0713-cb235e28cf79
# ╟─f65ddffa-e63a-11ea-34a6-2fa9284e98fa
# ╟─0b12cf52-e6e3-11ea-1a01-dd0c49c9e641
# ╟─6f70033a-e6cc-11ea-373e-6dcbaaa53d15
# ╟─9ffe84c0-dff0-11ea-2726-8924892df73a
# ╟─7d52252e-e006-11ea-2632-df2af831b52f
# ╟─f75fae30-dfee-11ea-18ef-259321acfa2f
# ╟─747d446a-dfeb-11ea-3533-c9404fd41688
# ╟─1811955d-618d-49e3-9f81-63195e2632fe
# ╟─87c5e5d4-c343-49fb-bc7e-6b2c0e647a38
# ╟─00000000-0000-0000-0000-000000000001
# ╟─00000000-0000-0000-0000-000000000002
