def get_vep_variant(chrom='1', pos='1', ref='A', alt='G', annotation="ADK"):
    variant_id = '_'.join([chrom, pos, ref, alt])
    variant = {
        "CHROM":chrom,
        "POS":pos,
        "INFO":"Annotation={0}".format(annotation),
        'vep_info':{
            'A': [{
                "Gene": annotation,
                "Consequence": 'transcript_ablation' 
            }]
        },
        "variant_id": variant_id
    }
    return variant
Return a variant dictionary
dataset/ETHPy150Open moonso/genmod/tests/utils/test_get_annotation.py/get_vep_variant