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anthonyyazdaniml
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gliner-biomed-pre-training

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train

The dataset viewer is not available for this split.

Cannot extract the features (columns) for the split 'train' of the config 'default' of the dataset.

Error code:   FeaturesError
Exception:    ValueError
Message:      Failed to convert pandas DataFrame to Arrow Table from file hf://datasets/anthonyyazdaniml/gliner-biomed-pre-training@a214a430bcf8f72c406d27ab13d8c3c4e71c19ac/pre-training.json.
Traceback:    Traceback (most recent call last):
                File "/src/services/worker/src/worker/job_runners/split/first_rows.py", line 228, in compute_first_rows_from_streaming_response
                  iterable_dataset = iterable_dataset._resolve_features()
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 3422, in _resolve_features
                  features = _infer_features_from_batch(self.with_format(None)._head())
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 2187, in _head
                  return next(iter(self.iter(batch_size=n)))
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 2391, in iter
                  for key, example in iterator:
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 1882, in __iter__
                  for key, pa_table in self._iter_arrow():
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 1904, in _iter_arrow
                  yield from self.ex_iterable._iter_arrow()
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 499, in _iter_arrow
                  for key, pa_table in iterator:
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 346, in _iter_arrow
                  for key, pa_table in self.generate_tables_fn(**gen_kwags):
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/packaged_modules/json/json.py", line 172, in _generate_tables
                  raise ValueError(
              ValueError: Failed to convert pandas DataFrame to Arrow Table from file hf://datasets/anthonyyazdaniml/gliner-biomed-pre-training@a214a430bcf8f72c406d27ab13d8c3c4e71c19ac/pre-training.json.

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GLiNER-BioMed pre-training dataset

This dataset, used for the pre-training stage of the GLiNER-BioMed models, was introduced in the paper GLiNER-BioMed: A Suite of Efficient Models for Open Biomedical Named Entity Recognition.

Citation

If you use the GLiNER-BioMed models or datasets in your work, please cite:

@misc{yazdani2025glinerbiomedsuiteefficientmodels,
      title={GLiNER-BioMed: A Suite of Efficient Models for Open Biomedical Named Entity Recognition}, 
      author={Anthony Yazdani and Ihor Stepanov and Douglas Teodoro},
      year={2025},
      eprint={2504.00676},
      archivePrefix={arXiv},
      primaryClass={cs.CL},
      url={https://arxiv.org/abs/2504.00676}, 
}

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