<reponame>JackToppen/deep-hipsc-tracking
""" Tracking system """

from ._tracking import link_chains, remove_duplicates
from ._soft_assign import soft_assign
from ._utils import rolling_interp, rolling_slope, correlate_arrays
from .utils import (
    save_track_csvfile, load_track_csvfile, load_simulation_tsvfile, Link,
    position_to_velocity, smooth_velocity, find_flat_regions, rolling_window,
)
from .traces import TraceDB
from .tracking import link_all_chains, find_link_functions, merge_points_cluster
from .thresholds import DetectorThresholds
from .persistence_data import calc_track_persistence
from .tracking_pipeline import make_tracks_for_experiment

__all__ = [
    'link_chains', 'remove_duplicates', 'load_simulation_tsvfile',
    'soft_assign', 'save_track_csvfile', 'load_track_csvfile', 'Link',
    'link_all_chains', 'find_link_functions', 'DetectorThresholds',
    'position_to_velocity', 'smooth_velocity', 'find_flat_regions',
    'calc_track_persistence', 'rolling_window', 'rolling_interp', 'rolling_slope',
    'merge_points_cluster', 'correlate_arrays', 'TraceDB',
    'make_tracks_for_experiment',
]

""" Tracking system """

from ._tracking import link_chains, remove_duplicates
from ._soft_assign import soft_assign
from ._utils import rolling_interp, rolling_slope, correlate_arrays
from .utils import (
    save_track_csvfile, load_track_csvfile, load_simulation_tsvfile, Link,
    position_to_velocity, smooth_velocity, find_flat_regions, rolling_window,
)
from .traces import TraceDB
from .tracking import link_all_chains, find_link_functions, merge_points_cluster
from .thresholds import DetectorThresholds
from .persistence_data import calc_track_persistence
from .tracking_pipeline import make_tracks_for_experiment

__all__ = [
    'link_chains', 'remove_duplicates', 'load_simulation_tsvfile',
    'soft_assign', 'save_track_csvfile', 'load_track_csvfile', 'Link',
    'link_all_chains', 'find_link_functions', 'DetectorThresholds',
    'position_to_velocity', 'smooth_velocity', 'find_flat_regions',
    'calc_track_persistence', 'rolling_window', 'rolling_interp', 'rolling_slope',
    'merge_points_cluster', 'correlate_arrays', 'TraceDB',
    'make_tracks_for_experiment',
]
Tracking system