Input to Model
#476
by
shakeel604
- opened
I am having some confusion about the data format input to the model
I understand that you feed Rank value to the input but it is not clear when you perturb or knock down genes, it will still be treated in the same way due to self attention mechanism
Could you please clarify this with a simple example
Thank you
Thanks for your question. The input to the model is the rank value encoding. You do not need to alter the rank value encoding yourself - the InSilicoPerturber will perform the perturbation. For deletion, the genes are removed; for overexpression, the genes are moved to the front of the rank value encoding.
ctheodoris
changed discussion status to
closed
Thank you