Yuning You
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update
Browse files- test.ipynb +1 -1
test.ipynb
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@@ -153,7 +153,7 @@
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"### 3. match feature channels\n",
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"- we need a list which maps feature channels to ensemble ids: ```channel2ensembl_ids_target```\n",
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"- format: ```channel2ensembl_ids_target = [[ensemblid1_for_channel1, ensemblid2_for_channel1, ...], [ensemblid1_for_channel2, ensemblid2_for_channel2, ...], ...]```\n",
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"- one channel could correspond to multiple ensemble ids, e.g., when your original data the channels are annotated with gene names\n",
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"- you can use to BioMart map you each gene name to one or multiple ensemble ids"
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]
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},
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"### 3. match feature channels\n",
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"- we need a list which maps feature channels to ensemble ids: ```channel2ensembl_ids_target```\n",
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"- format: ```channel2ensembl_ids_target = [[ensemblid1_for_channel1, ensemblid2_for_channel1, ...], [ensemblid1_for_channel2, ensemblid2_for_channel2, ...], ...]```\n",
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"- one channel could correspond to multiple ensemble ids, e.g., when in your original data the channels are annotated with gene names\n",
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"- you can use to BioMart map you each gene name to one or multiple ensemble ids"
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]
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},
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