añadido print a los ls la

Dockerfile

@@ -59,5 +59,8 @@ RUN chmod +777 /home/.config/matplotlib
 
 RUN echo "RETICULATE_MINICONDA_PATH" $RETICULATE_MINICONDA_PATH
 
+COPY --chown=${USER_ID}:${GROUP_ID} ./entrypoint.sh ./entrypoint.sh
+RUN chmod +x ./entrypoint.sh
+
 #Online
 CMD ["R", "--quiet", "-e", "shiny::runApp(Sys.getenv('APP'), host='0.0.0.0', port=as.integer(Sys.getenv('RSTUDIO_PORT')))"]

entrypoint.sh

@@ -1,4 +1,25 @@
+#!/bin/bash --login
+set -e
+
+echo ". ${HOME}/miniconda3/etc/profile.d/conda.sh" >> ${HOME}/.bashrc
+# Make bash automatically activate the conda environment
+echo "conda activate ${ENV_PREFIX}" >> ~/.bashrc
+#echo "export WANDB_ENTITY=${WANDB_ENTITY:-default}" >> ${HOME}/.bashrc
+# echo "WANDB_ENTITY=${WANDB_ENTITY:-default}" >> ${HOME}/.Renviron
+
+# Define an array of environment variable names from the ENV_VARS Compose variable
+IFS=',' read -ra ENV_VAR_NAMES <<< "$ENV_VARS"
+
+echo "ENV_VAR_NAMES=${ENV_VAR_NAMES[@]}"
+
+# Loop through the array of environment variable names and set the variables
+for ENV_VAR_NAME in "${ENV_VAR_NAMES[@]}"; do
+  ENV_VAR_VALUE="${!ENV_VAR_NAME:-default}"
+  echo "$ENV_VAR_NAME=$ENV_VAR_VALUE" >> ${HOME}/.Renviron
+done
+
+ulimit -s 16384
+
 # start rstudio server
 /init
-exec "$@"
-
+exec "$@"

local_exec_docker.sh

@@ -17,8 +17,8 @@ flags=()
 if ((INTER == 1)); then
     echo "INTERACTIVE"
     flags+=("-it" "--entrypoint" "/bin/bash")
-#else
-    #flags+=( "--entrypoint" "entrypoint.sh")
+else
+    flags+=( "--entrypoint" "./entrypoint.sh")
 fi
 
 flags+=("--gpus" "all")

r_shiny_app/global.R

@@ -155,11 +155,11 @@ make_individual_dygraph <- function(i){
 # RETRIEVE WANDB RUNS & ARTIFACTS #
 ###################################
 
-system('ls -la /home/app', intern=TRUE)
+print(system('ls -la /home/app', intern=TRUE))
 
 api <- wandb$Api()
 
-system('ls -la /home/app', intern=TRUE)
+print(system('ls -la /home/app', intern=TRUE))
 
 print("Querying encoders")
 encs_l <- dvats$get_wandb_artifacts(project_path = glue(WANDB_ENTITY, "/", WANDB_PROJECT), 

r_shiny_app/server.R

@@ -580,8 +580,8 @@ shinyServer(function(input, output, session) {
             flush.console()
             #artifact_dir = ts_ar$download(root=DEFAULT_PATH_WANDB_ARTIFACTS)
             #print(paste0("Reactive tsdf | Read feather | Downloaded: ", artifact_dir))
-            system('ls -la /.artifacts', intern=TRUE)
-            system('ls -la /.artifacts/mvp-SWV:v1', intern=TRUE)
+            print(system('ls -la /.artifacts', intern=TRUE))
+            print(system('ls -la /.artifacts/mvp-SWV:v1', intern=TRUE))
             df <- read_feather(path, as_data_frame = TRUE, mmap = FALSE) %>% rename('timeindex' = `__index_level_0__`) 
             t_end = Sys.time()
             print(paste0("Reactive tsdf | Read feather | Execution time: ", t_end - t_init, " seconds"))