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| import torch | |
| import torch.nn as nn | |
| from torch.nn import functional as F | |
| from torch.optim import Adam, SGD | |
| from torch.utils.data import DataLoader | |
| import pickle | |
| from ..bert import BERT | |
| from ..seq_model import BERTSM | |
| from ..classifier_model import BERTForClassification | |
| from ..optim_schedule import ScheduledOptim | |
| import tqdm | |
| import sys | |
| import time | |
| import numpy as np | |
| # import visualization | |
| from sklearn.metrics import precision_score, recall_score, f1_score | |
| import matplotlib.pyplot as plt | |
| import seaborn as sns | |
| import pandas as pd | |
| from collections import defaultdict | |
| import os | |
| class ECE(nn.Module): | |
| def __init__(self, n_bins=15): | |
| """ | |
| n_bins (int): number of confidence interval bins | |
| """ | |
| super(ECE, self).__init__() | |
| bin_boundaries = torch.linspace(0, 1, n_bins + 1) | |
| self.bin_lowers = bin_boundaries[:-1] | |
| self.bin_uppers = bin_boundaries[1:] | |
| def forward(self, logits, labels): | |
| softmaxes = F.softmax(logits, dim=1) | |
| confidences, predictions = torch.max(softmaxes, 1) | |
| labels = torch.argmax(labels,1) | |
| accuracies = predictions.eq(labels) | |
| ece = torch.zeros(1, device=logits.device) | |
| for bin_lower, bin_upper in zip(self.bin_lowers, self.bin_uppers): | |
| # Calculated |confidence - accuracy| in each bin | |
| in_bin = confidences.gt(bin_lower.item()) * confidences.le(bin_upper.item()) | |
| prop_in_bin = in_bin.float().mean() | |
| if prop_in_bin.item() > 0: | |
| accuracy_in_bin = accuracies[in_bin].float().mean() | |
| avg_confidence_in_bin = confidences[in_bin].mean() | |
| ece += torch.abs(avg_confidence_in_bin - accuracy_in_bin) * prop_in_bin | |
| return ece | |
| def accurate_nb(preds, labels): | |
| pred_flat = np.argmax(preds, axis=1).flatten() | |
| labels_flat = np.argmax(labels, axis=1).flatten() | |
| labels_flat = labels.flatten() | |
| return np.sum(pred_flat == labels_flat) | |
| class BERTTrainer: | |
| """ | |
| BERTTrainer pretrains BERT model on input sequence of strategies. | |
| BERTTrainer make the pretrained BERT model with one training method objective. | |
| 1. Masked Strategy Modelling : 3.3.1 Task #1: Masked SM | |
| """ | |
| def __init__(self, bert: BERT, vocab_size: int, | |
| train_dataloader: DataLoader, val_dataloader: DataLoader = None, test_dataloader: DataLoader = None, | |
| lr: float = 1e-4, betas=(0.9, 0.999), weight_decay: float = 0.01, warmup_steps=5000, | |
| with_cuda: bool = True, cuda_devices=None, log_freq: int = 10, same_student_prediction = False, | |
| workspace_name=None, code=None): | |
| """ | |
| :param bert: BERT model which you want to train | |
| :param vocab_size: total word vocab size | |
| :param train_dataloader: train dataset data loader | |
| :param test_dataloader: test dataset data loader [can be None] | |
| :param lr: learning rate of optimizer | |
| :param betas: Adam optimizer betas | |
| :param weight_decay: Adam optimizer weight decay param | |
| :param with_cuda: traning with cuda | |
| :param log_freq: logging frequency of the batch iteration | |
| """ | |
| cuda_condition = torch.cuda.is_available() and with_cuda | |
| self.device = torch.device("cuda:0" if cuda_condition else "cpu") | |
| print(cuda_condition, " Device used = ", self.device) | |
| available_gpus = list(range(torch.cuda.device_count())) | |
| # This BERT model will be saved every epoch | |
| self.bert = bert.to(self.device) | |
| # Initialize the BERT Language Model, with BERT model | |
| self.model = BERTSM(bert, vocab_size).to(self.device) | |
| # Distributed GPU training if CUDA can detect more than 1 GPU | |
| if with_cuda and torch.cuda.device_count() > 1: | |
| print("Using %d GPUS for BERT" % torch.cuda.device_count()) | |
| self.model = nn.DataParallel(self.model, device_ids=available_gpus) | |
| # Setting the train and test data loader | |
| self.train_data = train_dataloader | |
| self.val_data = val_dataloader | |
| self.test_data = test_dataloader | |
| # Setting the Adam optimizer with hyper-param | |
| self.optim = Adam(self.model.parameters(), lr=lr, betas=betas, weight_decay=weight_decay) | |
| self.optim_schedule = ScheduledOptim(self.optim, self.bert.hidden, n_warmup_steps=warmup_steps) | |
| # Using Negative Log Likelihood Loss function for predicting the masked_token | |
| self.criterion = nn.NLLLoss(ignore_index=0) | |
| self.log_freq = log_freq | |
| self.same_student_prediction = same_student_prediction | |
| self.workspace_name = workspace_name | |
| self.save_model = False | |
| self.code = code | |
| self.avg_loss = 10000 | |
| self.start_time = time.time() | |
| print("Total Parameters:", sum([p.nelement() for p in self.model.parameters()])) | |
| def train(self, epoch): | |
| self.iteration(epoch, self.train_data) | |
| def val(self, epoch): | |
| self.iteration(epoch, self.val_data, phase="val") | |
| def test(self, epoch): | |
| self.iteration(epoch, self.test_data, phase="test") | |
| def iteration(self, epoch, data_loader, phase="train"): | |
| """ | |
| loop over the data_loader for training or testing | |
| if on train status, backward operation is activated | |
| and also auto save the model every peoch | |
| :param epoch: current epoch index | |
| :param data_loader: torch.utils.data.DataLoader for iteration | |
| :param train: boolean value of is train or test | |
| :return: None | |
| """ | |
| # str_code = "train" if train else "test" | |
| # code = "masked_prediction" if self.same_student_prediction else "masked" | |
| self.log_file = f"{self.workspace_name}/logs/{self.code}/log_{phase}_pretrained.txt" | |
| # bert_hidden_representations = [] | |
| if epoch == 0: | |
| f = open(self.log_file, 'w') | |
| f.close() | |
| if phase == "val": | |
| self.avg_loss = 10000 | |
| # Setting the tqdm progress bar | |
| data_iter = tqdm.tqdm(enumerate(data_loader), | |
| desc="EP_%s:%d" % (phase, epoch), | |
| total=len(data_loader), | |
| bar_format="{l_bar}{r_bar}") | |
| avg_loss_mask = 0.0 | |
| total_correct_mask = 0 | |
| total_element_mask = 0 | |
| avg_loss_pred = 0.0 | |
| total_correct_pred = 0 | |
| total_element_pred = 0 | |
| avg_loss = 0.0 | |
| if phase == "train": | |
| self.model.train() | |
| else: | |
| self.model.eval() | |
| with open(self.log_file, 'a') as f: | |
| sys.stdout = f | |
| for i, data in data_iter: | |
| # 0. batch_data will be sent into the device(GPU or cpu) | |
| data = {key: value.to(self.device) for key, value in data.items()} | |
| # if i == 0: | |
| # print(f"data : {data[0]}") | |
| # 1. forward the next_sentence_prediction and masked_lm model | |
| # next_sent_output, mask_lm_output = self.model.forward(data["bert_input"], data["segment_label"]) | |
| if self.same_student_prediction: | |
| bert_hidden_rep, mask_lm_output, same_student_output = self.model.forward(data["bert_input"], data["segment_label"], self.same_student_prediction) | |
| else: | |
| bert_hidden_rep, mask_lm_output = self.model.forward(data["bert_input"], data["segment_label"], self.same_student_prediction) | |
| # embeddings = [h for h in bert_hidden_rep.cpu().detach().numpy()] | |
| # bert_hidden_representations.extend(embeddings) | |
| # 2-2. NLLLoss of predicting masked token word | |
| mask_loss = self.criterion(mask_lm_output.transpose(1, 2), data["bert_label"]) | |
| # 2-3. Adding next_loss and mask_loss : 3.4 Pre-training Procedure | |
| if self.same_student_prediction: | |
| # 2-1. NLL(negative log likelihood) loss of is_next classification result | |
| same_student_loss = self.criterion(same_student_output, data["is_same_student"]) | |
| loss = same_student_loss + mask_loss | |
| else: | |
| loss = mask_loss | |
| # 3. backward and optimization only in train | |
| if phase == "train": | |
| self.optim_schedule.zero_grad() | |
| loss.backward() | |
| self.optim_schedule.step_and_update_lr() | |
| # print(f"mask_lm_output : {mask_lm_output}") | |
| # non_zero_mask = (data["bert_label"] != 0).float() | |
| # print(f"bert_label : {data['bert_label']}") | |
| non_zero_mask = (data["bert_label"] != 0).float() | |
| predictions = torch.argmax(mask_lm_output, dim=-1) | |
| # print(f"predictions : {predictions}") | |
| predicted_masked = predictions*non_zero_mask | |
| # print(f"predicted_masked : {predicted_masked}") | |
| mask_correct = ((data["bert_label"] == predicted_masked)*non_zero_mask).sum().item() | |
| # print(f"mask_correct : {mask_correct}") | |
| # print(f"non_zero_mask.sum().item() : {non_zero_mask.sum().item()}") | |
| avg_loss_mask += loss.item() | |
| total_correct_mask += mask_correct | |
| total_element_mask += non_zero_mask.sum().item() | |
| # total_element_mask += data["bert_label"].sum().item() | |
| torch.cuda.empty_cache() | |
| post_fix = { | |
| "epoch": epoch, | |
| "iter": i, | |
| "avg_loss": avg_loss_mask / (i + 1), | |
| "avg_acc_mask": (total_correct_mask / total_element_mask * 100) if total_element_mask != 0 else 0, | |
| "loss": loss.item() | |
| } | |
| # next sentence prediction accuracy | |
| if self.same_student_prediction: | |
| correct = same_student_output.argmax(dim=-1).eq(data["is_same_student"]).sum().item() | |
| avg_loss_pred += loss.item() | |
| total_correct_pred += correct | |
| total_element_pred += data["is_same_student"].nelement() | |
| # correct = next_sent_output.argmax(dim=-1).eq(data["is_next"]).sum().item() | |
| post_fix["avg_loss"] = avg_loss_pred / (i + 1) | |
| post_fix["avg_acc_pred"] = total_correct_pred / total_element_pred * 100 | |
| post_fix["loss"] = loss.item() | |
| avg_loss +=loss.item() | |
| if i % self.log_freq == 0: | |
| data_iter.write(str(post_fix)) | |
| # if not train and epoch > 20 : | |
| # pickle.dump(mask_lm_output.cpu().detach().numpy(), open(f"logs/mask/mask_out_e{epoch}_{i}.pkl","wb")) | |
| # pickle.dump(data["bert_label"].cpu().detach().numpy(), open(f"logs/mask/label_e{epoch}_{i}.pkl","wb")) | |
| end_time = time.time() | |
| final_msg = { | |
| "epoch": f"EP{epoch}_{phase}", | |
| "avg_loss": avg_loss / len(data_iter), | |
| "total_masked_acc": total_correct_mask * 100.0 / total_element_mask if total_element_mask != 0 else 0, | |
| "time_taken_from_start": end_time - self.start_time | |
| } | |
| if self.same_student_prediction: | |
| final_msg["total_prediction_acc"] = total_correct_pred * 100.0 / total_element_pred | |
| print(final_msg) | |
| f.close() | |
| sys.stdout = sys.__stdout__ | |
| if phase == "val": | |
| self.save_model = False | |
| if self.avg_loss > (avg_loss / len(data_iter)): | |
| self.save_model = True | |
| self.avg_loss = (avg_loss / len(data_iter)) | |
| # pickle.dump(bert_hidden_representations, open(f"embeddings/{code}/{str_code}_embeddings_{epoch}.pkl","wb")) | |
| def save(self, epoch, file_path="output/bert_trained.model"): | |
| """ | |
| Saving the current BERT model on file_path | |
| :param epoch: current epoch number | |
| :param file_path: model output path which gonna be file_path+"ep%d" % epoch | |
| :return: final_output_path | |
| """ | |
| # if self.code: | |
| # fpath = file_path.split("/") | |
| # # output_path = fpath[0]+ "/"+ fpath[1]+f"/{self.code}/" + fpath[2] + ".ep%d" % epoch | |
| # output_path = "/",join(fpath[0]+ "/"+ fpath[1]+f"/{self.code}/" + fpath[-1] + ".ep%d" % epoch | |
| # else: | |
| output_path = file_path + ".ep%d" % epoch | |
| torch.save(self.bert.cpu(), output_path) | |
| self.bert.to(self.device) | |
| print("EP:%d Model Saved on:" % epoch, output_path) | |
| return output_path | |
| class BERTFineTuneTrainer: | |
| def __init__(self, bert: BERT, vocab_size: int, | |
| train_dataloader: DataLoader, test_dataloader: DataLoader = None, | |
| lr: float = 1e-4, betas=(0.9, 0.999), weight_decay: float = 0.01, warmup_steps=10000, | |
| with_cuda: bool = True, cuda_devices=None, log_freq: int = 10, workspace_name=None, | |
| num_labels=2, finetune_task=""): | |
| """ | |
| :param bert: BERT model which you want to train | |
| :param vocab_size: total word vocab size | |
| :param train_dataloader: train dataset data loader | |
| :param test_dataloader: test dataset data loader [can be None] | |
| :param lr: learning rate of optimizer | |
| :param betas: Adam optimizer betas | |
| :param weight_decay: Adam optimizer weight decay param | |
| :param with_cuda: traning with cuda | |
| :param log_freq: logging frequency of the batch iteration | |
| """ | |
| # Setup cuda device for BERT training, argument -c, --cuda should be true | |
| cuda_condition = torch.cuda.is_available() and with_cuda | |
| self.device = torch.device("cuda:0" if cuda_condition else "cpu") | |
| print(with_cuda, cuda_condition, " Device used = ", self.device) | |
| # This BERT model will be saved every epoch | |
| self.bert = bert | |
| for param in self.bert.parameters(): | |
| param.requires_grad = False | |
| # Initialize the BERT Language Model, with BERT model | |
| self.model = BERTForClassification(self.bert, vocab_size, num_labels).to(self.device) | |
| # Distributed GPU training if CUDA can detect more than 1 GPU | |
| if with_cuda and torch.cuda.device_count() > 1: | |
| print("Using %d GPUS for BERT" % torch.cuda.device_count()) | |
| self.model = nn.DataParallel(self.model, device_ids=cuda_devices) | |
| # Setting the train and test data loader | |
| self.train_data = train_dataloader | |
| self.test_data = test_dataloader | |
| self.optim = Adam(self.model.parameters(), lr=lr, weight_decay=weight_decay) #, eps=1e-9 | |
| # self.scheduler = torch.optim.lr_scheduler.ReduceLROnPlateau(optimizer, 'min', patience=2, factor=0.1) | |
| if num_labels == 1: | |
| self.criterion = nn.MSELoss() | |
| elif num_labels == 2: | |
| self.criterion = nn.BCEWithLogitsLoss() | |
| # self.criterion = nn.CrossEntropyLoss() | |
| elif num_labels > 2: | |
| self.criterion = nn.CrossEntropyLoss() | |
| # self.criterion = nn.BCEWithLogitsLoss() | |
| # self.ece_criterion = ECE().to(self.device) | |
| self.log_freq = log_freq | |
| self.workspace_name = workspace_name | |
| self.finetune_task = finetune_task | |
| self.save_model = False | |
| self.avg_loss = 10000 | |
| self.start_time = time.time() | |
| self.probability_list = [] | |
| print("Total Parameters:", sum([p.nelement() for p in self.model.parameters()])) | |
| def train(self, epoch): | |
| self.iteration(epoch, self.train_data) | |
| def test(self, epoch): | |
| self.iteration(epoch, self.test_data, train=False) | |
| def iteration(self, epoch, data_loader, train=True): | |
| """ | |
| loop over the data_loader for training or testing | |
| if on train status, backward operation is activated | |
| and also auto save the model every peoch | |
| :param epoch: current epoch index | |
| :param data_loader: torch.utils.data.DataLoader for iteration | |
| :param train: boolean value of is train or test | |
| :return: None | |
| """ | |
| str_code = "train" if train else "test" | |
| self.log_file = f"{self.workspace_name}/logs/{self.finetune_task}/log_{str_code}_finetuned.txt" | |
| if epoch == 0: | |
| f = open(self.log_file, 'w') | |
| f.close() | |
| if not train: | |
| self.avg_loss = 10000 | |
| # Setting the tqdm progress bar | |
| data_iter = tqdm.tqdm(enumerate(data_loader), | |
| desc="EP_%s:%d" % (str_code, epoch), | |
| total=len(data_loader), | |
| bar_format="{l_bar}{r_bar}") | |
| avg_loss = 0.0 | |
| total_correct = 0 | |
| total_element = 0 | |
| plabels = [] | |
| tlabels = [] | |
| eval_accurate_nb = 0 | |
| nb_eval_examples = 0 | |
| logits_list = [] | |
| labels_list = [] | |
| if train: | |
| self.model.train() | |
| else: | |
| self.model.eval() | |
| self.probability_list = [] | |
| with open(self.log_file, 'a') as f: | |
| sys.stdout = f | |
| for i, data in data_iter: | |
| # 0. batch_data will be sent into the device(GPU or cpu) | |
| data = {key: value.to(self.device) for key, value in data.items()} | |
| if train: | |
| h_rep, logits = self.model.forward(data["bert_input"], data["segment_label"]) | |
| else: | |
| with torch.no_grad(): | |
| h_rep, logits = self.model.forward(data["bert_input"], data["segment_label"]) | |
| # print(logits, logits.shape) | |
| logits_list.append(logits.cpu()) | |
| labels_list.append(data["progress_status"].cpu()) | |
| # print(">>>>>>>>>>>>", progress_output) | |
| # print(f"{epoch}---nelement--- {data['progress_status'].nelement()}") | |
| # print(data["progress_status"].shape, logits.shape) | |
| progress_loss = self.criterion(logits, data["progress_status"]) | |
| loss = progress_loss | |
| if torch.cuda.device_count() > 1: | |
| loss = loss.mean() | |
| # 3. backward and optimization only in train | |
| if train: | |
| self.optim.zero_grad() | |
| loss.backward() | |
| # torch.nn.utils.clip_grad_norm_(self.model.parameters(), 1.0) | |
| self.optim.step() | |
| # progress prediction accuracy | |
| # correct = progress_output.argmax(dim=-1).eq(data["progress_status"]).sum().item() | |
| probs = nn.LogSoftmax(dim=-1)(logits) | |
| self.probability_list.append(probs) | |
| predicted_labels = torch.argmax(probs, dim=-1) | |
| true_labels = torch.argmax(data["progress_status"], dim=-1) | |
| plabels.extend(predicted_labels.cpu().numpy()) | |
| tlabels.extend(true_labels.cpu().numpy()) | |
| # Compare predicted labels to true labels and calculate accuracy | |
| correct = (predicted_labels == true_labels).sum().item() | |
| avg_loss += loss.item() | |
| total_correct += correct | |
| # total_element += true_labels.nelement() | |
| total_element += data["progress_status"].nelement() | |
| # print(">>>>>>>>>>>>>>", predicted_labels, true_labels, correct, total_correct, total_element) | |
| # if train: | |
| post_fix = { | |
| "epoch": epoch, | |
| "iter": i, | |
| "avg_loss": avg_loss / (i + 1), | |
| "avg_acc": total_correct / total_element * 100, | |
| "loss": loss.item() | |
| } | |
| # else: | |
| # logits = logits.detach().cpu().numpy() | |
| # label_ids = data["progress_status"].to('cpu').numpy() | |
| # tmp_eval_nb = accurate_nb(logits, label_ids) | |
| # eval_accurate_nb += tmp_eval_nb | |
| # nb_eval_examples += label_ids.shape[0] | |
| # # total_element += data["progress_status"].nelement() | |
| # # avg_loss += loss.item() | |
| # post_fix = { | |
| # "epoch": epoch, | |
| # "iter": i, | |
| # "avg_loss": avg_loss / (i + 1), | |
| # "avg_acc": tmp_eval_nb / total_element * 100, | |
| # "loss": loss.item() | |
| # } | |
| if i % self.log_freq == 0: | |
| data_iter.write(str(post_fix)) | |
| # precisions = precision_score(plabels, tlabels, average="weighted") | |
| # recalls = recall_score(plabels, tlabels, average="weighted") | |
| f1_scores = f1_score(plabels, tlabels, average="weighted") | |
| # if train: | |
| end_time = time.time() | |
| final_msg = { | |
| "epoch": f"EP{epoch}_{str_code}", | |
| "avg_loss": avg_loss / len(data_iter), | |
| "total_acc": total_correct * 100.0 / total_element, | |
| # "precisions": precisions, | |
| # "recalls": recalls, | |
| "f1_scores": f1_scores, | |
| "time_taken_from_start": end_time - self.start_time | |
| } | |
| # else: | |
| # eval_accuracy = eval_accurate_nb/nb_eval_examples | |
| # logits_ece = torch.cat(logits_list) | |
| # labels_ece = torch.cat(labels_list) | |
| # ece = self.ece_criterion(logits_ece, labels_ece).item() | |
| # end_time = time.time() | |
| # final_msg = { | |
| # "epoch": f"EP{epoch}_{str_code}", | |
| # "eval_accuracy": eval_accuracy, | |
| # "ece": ece, | |
| # "avg_loss": avg_loss / len(data_iter), | |
| # "precisions": precisions, | |
| # "recalls": recalls, | |
| # "f1_scores": f1_scores, | |
| # "time_taken_from_start": end_time - self.start_time | |
| # } | |
| # if self.save_model: | |
| # conf_hist = visualization.ConfidenceHistogram() | |
| # plt_test = conf_hist.plot(np.array(logits_ece), np.array(labels_ece), title= f"Confidence Histogram {epoch}") | |
| # plt_test.savefig(f"{self.workspace_name}/plots/confidence_histogram/{self.finetune_task}/conf_histogram_test_{epoch}.png",bbox_inches='tight') | |
| # plt_test.close() | |
| # rel_diagram = visualization.ReliabilityDiagram() | |
| # plt_test_2 = rel_diagram.plot(np.array(logits_ece), np.array(labels_ece),title=f"Reliability Diagram {epoch}") | |
| # plt_test_2.savefig(f"{self.workspace_name}/plots/confidence_histogram/{self.finetune_task}/rel_diagram_test_{epoch}.png",bbox_inches='tight') | |
| # plt_test_2.close() | |
| print(final_msg) | |
| # print("EP%d_%s, avg_loss=" % (epoch, str_code), avg_loss / len(data_iter), "total_acc=", total_correct * 100.0 / total_element) | |
| f.close() | |
| sys.stdout = sys.__stdout__ | |
| self.save_model = False | |
| if self.avg_loss > (avg_loss / len(data_iter)): | |
| self.save_model = True | |
| self.avg_loss = (avg_loss / len(data_iter)) | |
| def iteration_1(self, epoch_idx, data): | |
| try: | |
| data = {key: value.to(self.device) for key, value in data.items()} | |
| logits = self.model(data['input_ids'], data['segment_label']) | |
| # Ensure logits is a tensor, not a tuple | |
| loss_fct = nn.CrossEntropyLoss() | |
| loss = loss_fct(logits, data['labels']) | |
| # Backpropagation and optimization | |
| self.optim.zero_grad() | |
| loss.backward() | |
| self.optim.step() | |
| if self.log_freq > 0 and epoch_idx % self.log_freq == 0: | |
| print(f"Epoch {epoch_idx}: Loss = {loss.item()}") | |
| return loss | |
| except Exception as e: | |
| print(f"Error during iteration: {e}") | |
| raise | |
| # plt_test.show() | |
| # print("EP%d_%s, " % (epoch, str_code)) | |
| def save(self, epoch, file_path="output/bert_fine_tuned_trained.model"): | |
| """ | |
| Saving the current BERT model on file_path | |
| :param epoch: current epoch number | |
| :param file_path: model output path which gonna be file_path+"ep%d" % epoch | |
| :return: final_output_path | |
| """ | |
| if self.finetune_task: | |
| fpath = file_path.split("/") | |
| output_path = fpath[0]+ "/"+ fpath[1]+f"/{self.finetune_task}/" + fpath[2] + ".ep%d" % epoch | |
| else: | |
| output_path = file_path + ".ep%d" % epoch | |
| torch.save(self.model.cpu(), output_path) | |
| self.model.to(self.device) | |
| print("EP:%d Model Saved on:" % epoch, output_path) | |
| return output_path | |
| class BERTAttention: | |
| def __init__(self, bert: BERT, vocab_obj, train_dataloader: DataLoader, workspace_name=None, code=None, finetune_task=None, with_cuda=True): | |
| # available_gpus = list(range(torch.cuda.device_count())) | |
| cuda_condition = torch.cuda.is_available() and with_cuda | |
| self.device = torch.device("cuda:0" if cuda_condition else "cpu") | |
| print(with_cuda, cuda_condition, " Device used = ", self.device) | |
| self.bert = bert.to(self.device) | |
| # if with_cuda and torch.cuda.device_count() > 1: | |
| # print("Using %d GPUS for BERT" % torch.cuda.device_count()) | |
| # self.bert = nn.DataParallel(self.bert, device_ids=available_gpus) | |
| self.train_dataloader = train_dataloader | |
| self.workspace_name = workspace_name | |
| self.code = code | |
| self.finetune_task = finetune_task | |
| self.vocab_obj = vocab_obj | |
| def getAttention(self): | |
| # self.log_file = f"{self.workspace_name}/logs/{self.code}/log_attention.txt" | |
| labels = ['PercentChange', 'NumeratorQuantity2', 'NumeratorQuantity1', 'DenominatorQuantity1', | |
| 'OptionalTask_1', 'EquationAnswer', 'NumeratorFactor', 'DenominatorFactor', | |
| 'OptionalTask_2', 'FirstRow1:1', 'FirstRow1:2', 'FirstRow2:1', 'FirstRow2:2', 'SecondRow', | |
| 'ThirdRow', 'FinalAnswer','FinalAnswerDirection'] | |
| df_all = pd.DataFrame(0.0, index=labels, columns=labels) | |
| # Setting the tqdm progress bar | |
| data_iter = tqdm.tqdm(enumerate(self.train_dataloader), | |
| desc="attention", | |
| total=len(self.train_dataloader), | |
| bar_format="{l_bar}{r_bar}") | |
| count = 0 | |
| for i, data in data_iter: | |
| data = {key: value.to(self.device) for key, value in data.items()} | |
| a = self.bert.forward(data["bert_input"], data["segment_label"]) | |
| non_zero = np.sum(data["segment_label"].cpu().detach().numpy()) | |
| # Last Transformer Layer | |
| last_layer = self.bert.attention_values[-1].transpose(1,0,2,3) | |
| # print(last_layer.shape) | |
| head, d_model, s, s = last_layer.shape | |
| for d in range(d_model): | |
| seq_labels = self.vocab_obj.to_sentence(data["bert_input"].cpu().detach().numpy().tolist()[d])[1:non_zero-1] | |
| # df_all = pd.DataFrame(0.0, index=seq_labels, columns=seq_labels) | |
| indices_to_choose = defaultdict(int) | |
| for k,s in enumerate(seq_labels): | |
| if s in labels: | |
| indices_to_choose[s] = k | |
| indices_chosen = list(indices_to_choose.values()) | |
| selected_seq_labels = [s for l,s in enumerate(seq_labels) if l in indices_chosen] | |
| # print(len(seq_labels), len(selected_seq_labels)) | |
| for h in range(head): | |
| # fig, ax = plt.subplots(figsize=(12, 12)) | |
| # seq_labels = self.vocab_obj.to_sentence(data["bert_input"].cpu().detach().numpy().tolist()[d])#[1:non_zero-1] | |
| # seq_labels = self.vocab_obj.to_sentence(data["bert_input"].cpu().detach().numpy().tolist()[d])[1:non_zero-1] | |
| # indices_to_choose = defaultdict(int) | |
| # for k,s in enumerate(seq_labels): | |
| # if s in labels: | |
| # indices_to_choose[s] = k | |
| # indices_chosen = list(indices_to_choose.values()) | |
| # selected_seq_labels = [s for l,s in enumerate(seq_labels) if l in indices_chosen] | |
| # print(f"Chosen index: {seq_labels, indices_to_choose, indices_chosen, selected_seq_labels}") | |
| df_cm = pd.DataFrame(last_layer[h][d][indices_chosen,:][:,indices_chosen], index = selected_seq_labels, columns = selected_seq_labels) | |
| df_all = df_all.add(df_cm, fill_value=0) | |
| count += 1 | |
| # df_cm = pd.DataFrame(last_layer[h][d][1:non_zero-1,:][:,1:non_zero-1], index=seq_labels, columns=seq_labels) | |
| # df_all = df_all.add(df_cm, fill_value=0) | |
| # df_all = df_all.reindex(index=seq_labels, columns=seq_labels) | |
| # sns.heatmap(df_all, annot=False) | |
| # plt.title("Attentions") #Probabilities | |
| # plt.xlabel("Steps") | |
| # plt.ylabel("Steps") | |
| # plt.grid(True) | |
| # plt.tick_params(axis='x', bottom=False, top=True, labelbottom=False, labeltop=True, labelrotation=90) | |
| # plt.savefig(f"{self.workspace_name}/plots/{self.code}/{self.finetune_task}_attention_scores_over_[{h}]_head_n_data[{d}].png", bbox_inches='tight') | |
| # plt.show() | |
| # plt.close() | |
| print(f"Count of total : {count, head * self.train_dataloader.dataset.len}") | |
| df_all = df_all.div(count) # head * self.train_dataloader.dataset.len | |
| df_all = df_all.reindex(index=labels, columns=labels) | |
| sns.heatmap(df_all, annot=False) | |
| plt.title("Attentions") #Probabilities | |
| plt.xlabel("Steps") | |
| plt.ylabel("Steps") | |
| plt.grid(True) | |
| plt.tick_params(axis='x', bottom=False, top=True, labelbottom=False, labeltop=True, labelrotation=90) | |
| plt.savefig(f"{self.workspace_name}/plots/{self.code}/{self.finetune_task}_attention_scores.png", bbox_inches='tight') | |
| plt.show() | |
| plt.close() | |