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import logging |
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import re |
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import json |
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import time |
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import os |
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|
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import copy |
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from elasticsearch import Elasticsearch, NotFoundError |
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from elasticsearch_dsl import UpdateByQuery, Q, Search, Index |
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from elastic_transport import ConnectionTimeout |
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from rag import settings |
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from rag.settings import TAG_FLD, PAGERANK_FLD |
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from rag.utils import singleton |
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from api.utils.file_utils import get_project_base_directory |
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from rag.utils.doc_store_conn import DocStoreConnection, MatchExpr, OrderByExpr, MatchTextExpr, MatchDenseExpr, \ |
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FusionExpr |
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from rag.nlp import is_english, rag_tokenizer |
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|
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ATTEMPT_TIME = 2 |
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|
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logger = logging.getLogger('ragflow.es_conn') |
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|
|
|
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@singleton |
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class ESConnection(DocStoreConnection): |
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def __init__(self): |
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self.info = {} |
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logger.info(f"Use Elasticsearch {settings.ES['hosts']} as the doc engine.") |
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for _ in range(ATTEMPT_TIME): |
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try: |
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self.es = Elasticsearch( |
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settings.ES["hosts"].split(","), |
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basic_auth=(settings.ES["username"], settings.ES[ |
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"password"]) if "username" in settings.ES and "password" in settings.ES else None, |
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verify_certs=False, |
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timeout=600 |
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) |
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if self.es: |
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self.info = self.es.info() |
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break |
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except Exception as e: |
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logger.warning(f"{str(e)}. Waiting Elasticsearch {settings.ES['hosts']} to be healthy.") |
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time.sleep(5) |
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if not self.es.ping(): |
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msg = f"Elasticsearch {settings.ES['hosts']} is unhealthy in 120s." |
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logger.error(msg) |
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raise Exception(msg) |
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v = self.info.get("version", {"number": "8.11.3"}) |
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v = v["number"].split(".")[0] |
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if int(v) < 8: |
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msg = f"Elasticsearch version must be greater than or equal to 8, current version: {v}" |
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logger.error(msg) |
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raise Exception(msg) |
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fp_mapping = os.path.join(get_project_base_directory(), "conf", "mapping.json") |
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if not os.path.exists(fp_mapping): |
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msg = f"Elasticsearch mapping file not found at {fp_mapping}" |
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logger.error(msg) |
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raise Exception(msg) |
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self.mapping = json.load(open(fp_mapping, "r")) |
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logger.info(f"Elasticsearch {settings.ES['hosts']} is healthy.") |
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|
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""" |
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Database operations |
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""" |
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|
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def dbType(self) -> str: |
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return "elasticsearch" |
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|
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def health(self) -> dict: |
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health_dict = dict(self.es.cluster.health()) |
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health_dict["type"] = "elasticsearch" |
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return health_dict |
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|
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""" |
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Table operations |
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""" |
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|
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def createIdx(self, indexName: str, knowledgebaseId: str, vectorSize: int): |
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if self.indexExist(indexName, knowledgebaseId): |
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return True |
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try: |
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from elasticsearch.client import IndicesClient |
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return IndicesClient(self.es).create(index=indexName, |
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settings=self.mapping["settings"], |
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mappings=self.mapping["mappings"]) |
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except Exception: |
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logger.exception("ESConnection.createIndex error %s" % (indexName)) |
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|
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def deleteIdx(self, indexName: str, knowledgebaseId: str): |
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if len(knowledgebaseId) > 0: |
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|
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return |
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try: |
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self.es.indices.delete(index=indexName, allow_no_indices=True) |
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except NotFoundError: |
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pass |
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except Exception: |
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logger.exception("ESConnection.deleteIdx error %s" % (indexName)) |
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|
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def indexExist(self, indexName: str, knowledgebaseId: str) -> bool: |
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s = Index(indexName, self.es) |
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for i in range(ATTEMPT_TIME): |
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try: |
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return s.exists() |
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except Exception as e: |
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logger.exception("ESConnection.indexExist got exception") |
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if str(e).find("Timeout") > 0 or str(e).find("Conflict") > 0: |
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continue |
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break |
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return False |
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|
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""" |
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CRUD operations |
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""" |
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|
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def search( |
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self, selectFields: list[str], |
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highlightFields: list[str], |
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condition: dict, |
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matchExprs: list[MatchExpr], |
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orderBy: OrderByExpr, |
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offset: int, |
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limit: int, |
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indexNames: str | list[str], |
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knowledgebaseIds: list[str], |
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aggFields: list[str] = [], |
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rank_feature: dict | None = None |
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): |
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""" |
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Refers to https://www.elastic.co/guide/en/elasticsearch/reference/current/query-dsl.html |
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""" |
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if isinstance(indexNames, str): |
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indexNames = indexNames.split(",") |
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assert isinstance(indexNames, list) and len(indexNames) > 0 |
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assert "_id" not in condition |
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|
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bqry = Q("bool", must=[]) |
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condition["kb_id"] = knowledgebaseIds |
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for k, v in condition.items(): |
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if k == "available_int": |
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if v == 0: |
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bqry.filter.append(Q("range", available_int={"lt": 1})) |
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else: |
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bqry.filter.append( |
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Q("bool", must_not=Q("range", available_int={"lt": 1}))) |
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continue |
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if not v: |
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continue |
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if isinstance(v, list): |
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bqry.filter.append(Q("terms", **{k: v})) |
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elif isinstance(v, str) or isinstance(v, int): |
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bqry.filter.append(Q("term", **{k: v})) |
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else: |
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raise Exception( |
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f"Condition `{str(k)}={str(v)}` value type is {str(type(v))}, expected to be int, str or list.") |
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|
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s = Search() |
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vector_similarity_weight = 0.5 |
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for m in matchExprs: |
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if isinstance(m, FusionExpr) and m.method == "weighted_sum" and "weights" in m.fusion_params: |
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assert len(matchExprs) == 3 and isinstance(matchExprs[0], MatchTextExpr) and isinstance(matchExprs[1], |
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MatchDenseExpr) and isinstance( |
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matchExprs[2], FusionExpr) |
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weights = m.fusion_params["weights"] |
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vector_similarity_weight = float(weights.split(",")[1]) |
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for m in matchExprs: |
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if isinstance(m, MatchTextExpr): |
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minimum_should_match = m.extra_options.get("minimum_should_match", 0.0) |
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if isinstance(minimum_should_match, float): |
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minimum_should_match = str(int(minimum_should_match * 100)) + "%" |
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bqry.must.append(Q("query_string", fields=m.fields, |
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type="best_fields", query=m.matching_text, |
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minimum_should_match=minimum_should_match, |
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boost=1)) |
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bqry.boost = 1.0 - vector_similarity_weight |
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|
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elif isinstance(m, MatchDenseExpr): |
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assert (bqry is not None) |
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similarity = 0.0 |
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if "similarity" in m.extra_options: |
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similarity = m.extra_options["similarity"] |
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s = s.knn(m.vector_column_name, |
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m.topn, |
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m.topn * 2, |
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query_vector=list(m.embedding_data), |
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filter=bqry.to_dict(), |
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similarity=similarity, |
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) |
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|
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if bqry and rank_feature: |
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for fld, sc in rank_feature.items(): |
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if fld != PAGERANK_FLD: |
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fld = f"{TAG_FLD}.{fld}" |
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bqry.should.append(Q("rank_feature", field=fld, linear={}, boost=sc)) |
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|
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if bqry: |
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s = s.query(bqry) |
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for field in highlightFields: |
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s = s.highlight(field) |
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|
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if orderBy: |
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orders = list() |
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for field, order in orderBy.fields: |
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order = "asc" if order == 0 else "desc" |
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if field in ["page_num_int", "top_int"]: |
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order_info = {"order": order, "unmapped_type": "float", |
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"mode": "avg", "numeric_type": "double"} |
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elif field.endswith("_int") or field.endswith("_flt"): |
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order_info = {"order": order, "unmapped_type": "float"} |
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else: |
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order_info = {"order": order, "unmapped_type": "text"} |
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orders.append({field: order_info}) |
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s = s.sort(*orders) |
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|
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for fld in aggFields: |
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s.aggs.bucket(f'aggs_{fld}', 'terms', field=fld, size=1000000) |
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|
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if limit > 0: |
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s = s[offset:offset + limit] |
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q = s.to_dict() |
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logger.debug(f"ESConnection.search {str(indexNames)} query: " + json.dumps(q)) |
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|
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for i in range(ATTEMPT_TIME): |
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try: |
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|
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res = self.es.search(index=indexNames, |
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body=q, |
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timeout="600s", |
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|
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track_total_hits=True, |
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_source=True) |
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if str(res.get("timed_out", "")).lower() == "true": |
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raise Exception("Es Timeout.") |
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logger.debug(f"ESConnection.search {str(indexNames)} res: " + str(res)) |
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return res |
|
except Exception as e: |
|
logger.exception(f"ESConnection.search {str(indexNames)} query: " + str(q)) |
|
if str(e).find("Timeout") > 0: |
|
continue |
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raise e |
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logger.error("ESConnection.search timeout for 3 times!") |
|
raise Exception("ESConnection.search timeout.") |
|
|
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def get(self, chunkId: str, indexName: str, knowledgebaseIds: list[str]) -> dict | None: |
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for i in range(ATTEMPT_TIME): |
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try: |
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res = self.es.get(index=(indexName), |
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id=chunkId, source=True, ) |
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if str(res.get("timed_out", "")).lower() == "true": |
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raise Exception("Es Timeout.") |
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chunk = res["_source"] |
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chunk["id"] = chunkId |
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return chunk |
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except NotFoundError: |
|
return None |
|
except Exception as e: |
|
logger.exception(f"ESConnection.get({chunkId}) got exception") |
|
if str(e).find("Timeout") > 0: |
|
continue |
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raise e |
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logger.error("ESConnection.get timeout for 3 times!") |
|
raise Exception("ESConnection.get timeout.") |
|
|
|
def insert(self, documents: list[dict], indexName: str, knowledgebaseId: str = None) -> list[str]: |
|
|
|
operations = [] |
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for d in documents: |
|
assert "_id" not in d |
|
assert "id" in d |
|
d_copy = copy.deepcopy(d) |
|
meta_id = d_copy.pop("id", "") |
|
operations.append( |
|
{"index": {"_index": indexName, "_id": meta_id}}) |
|
operations.append(d_copy) |
|
|
|
res = [] |
|
for _ in range(ATTEMPT_TIME): |
|
try: |
|
res = [] |
|
r = self.es.bulk(index=(indexName), operations=operations, |
|
refresh=False, timeout="60s") |
|
if re.search(r"False", str(r["errors"]), re.IGNORECASE): |
|
return res |
|
|
|
for item in r["items"]: |
|
for action in ["create", "delete", "index", "update"]: |
|
if action in item and "error" in item[action]: |
|
res.append(str(item[action]["_id"]) + ":" + str(item[action]["error"])) |
|
return res |
|
except Exception as e: |
|
res.append(str(e)) |
|
logger.warning("ESConnection.insert got exception: " + str(e)) |
|
res = [] |
|
if re.search(r"(Timeout|time out)", str(e), re.IGNORECASE): |
|
res.append(str(e)) |
|
time.sleep(3) |
|
continue |
|
return res |
|
|
|
def update(self, condition: dict, newValue: dict, indexName: str, knowledgebaseId: str) -> bool: |
|
doc = copy.deepcopy(newValue) |
|
doc.pop("id", None) |
|
if "id" in condition and isinstance(condition["id"], str): |
|
|
|
chunkId = condition["id"] |
|
for i in range(ATTEMPT_TIME): |
|
try: |
|
self.es.update(index=indexName, id=chunkId, doc=doc) |
|
return True |
|
except Exception as e: |
|
logger.exception( |
|
f"ESConnection.update(index={indexName}, id={id}, doc={json.dumps(condition, ensure_ascii=False)}) got exception") |
|
if re.search(r"(timeout|connection)", str(e).lower()): |
|
continue |
|
break |
|
return False |
|
|
|
|
|
bqry = Q("bool") |
|
for k, v in condition.items(): |
|
if not isinstance(k, str) or not v: |
|
continue |
|
if k == "exist": |
|
bqry.filter.append(Q("exists", field=v)) |
|
continue |
|
if isinstance(v, list): |
|
bqry.filter.append(Q("terms", **{k: v})) |
|
elif isinstance(v, str) or isinstance(v, int): |
|
bqry.filter.append(Q("term", **{k: v})) |
|
else: |
|
raise Exception( |
|
f"Condition `{str(k)}={str(v)}` value type is {str(type(v))}, expected to be int, str or list.") |
|
scripts = [] |
|
params = {} |
|
for k, v in newValue.items(): |
|
if k == "remove": |
|
if isinstance(v, str): |
|
scripts.append(f"ctx._source.remove('{v}');") |
|
if isinstance(v, dict): |
|
for kk, vv in v.items(): |
|
scripts.append(f"int i=ctx._source.{kk}.indexOf(params.p_{kk});ctx._source.{kk}.remove(i);") |
|
params[f"p_{kk}"] = vv |
|
continue |
|
if k == "add": |
|
if isinstance(v, dict): |
|
for kk, vv in v.items(): |
|
scripts.append(f"ctx._source.{kk}.add(params.pp_{kk});") |
|
params[f"pp_{kk}"] = vv.strip() |
|
continue |
|
if (not isinstance(k, str) or not v) and k != "available_int": |
|
continue |
|
if isinstance(v, str): |
|
v = re.sub(r"(['\n\r]|\\.)", " ", v) |
|
scripts.append(f"ctx._source.{k}='{v}';") |
|
elif isinstance(v, int) or isinstance(v, float): |
|
scripts.append(f"ctx._source.{k}={v};") |
|
elif isinstance(v, list): |
|
scripts.append(f"ctx._source.{k}={json.dumps(v, ensure_ascii=False)};") |
|
else: |
|
raise Exception( |
|
f"newValue `{str(k)}={str(v)}` value type is {str(type(v))}, expected to be int, str.") |
|
ubq = UpdateByQuery( |
|
index=indexName).using( |
|
self.es).query(bqry) |
|
ubq = ubq.script(source="".join(scripts), params=params) |
|
ubq = ubq.params(refresh=True) |
|
ubq = ubq.params(slices=5) |
|
ubq = ubq.params(conflicts="proceed") |
|
|
|
for _ in range(ATTEMPT_TIME): |
|
try: |
|
_ = ubq.execute() |
|
return True |
|
except Exception as e: |
|
logger.error("ESConnection.update got exception: " + str(e) + "\n".join(scripts)) |
|
if re.search(r"(timeout|connection|conflict)", str(e).lower()): |
|
continue |
|
break |
|
return False |
|
|
|
def delete(self, condition: dict, indexName: str, knowledgebaseId: str) -> int: |
|
qry = None |
|
assert "_id" not in condition |
|
if "id" in condition: |
|
chunk_ids = condition["id"] |
|
if not isinstance(chunk_ids, list): |
|
chunk_ids = [chunk_ids] |
|
qry = Q("ids", values=chunk_ids) |
|
else: |
|
qry = Q("bool") |
|
for k, v in condition.items(): |
|
if k == "exists": |
|
qry.filter.append(Q("exists", field=v)) |
|
|
|
elif k == "must_not": |
|
if isinstance(v, dict): |
|
for kk, vv in v.items(): |
|
if kk == "exists": |
|
qry.must_not.append(Q("exists", field=vv)) |
|
|
|
elif isinstance(v, list): |
|
qry.must.append(Q("terms", **{k: v})) |
|
elif isinstance(v, str) or isinstance(v, int): |
|
qry.must.append(Q("term", **{k: v})) |
|
else: |
|
raise Exception("Condition value must be int, str or list.") |
|
logger.debug("ESConnection.delete query: " + json.dumps(qry.to_dict())) |
|
for _ in range(ATTEMPT_TIME): |
|
try: |
|
|
|
res = self.es.delete_by_query( |
|
index=indexName, |
|
body=Search().query(qry).to_dict(), |
|
refresh=True) |
|
return res["deleted"] |
|
except Exception as e: |
|
logger.warning("ESConnection.delete got exception: " + str(e)) |
|
if re.search(r"(timeout|connection)", str(e).lower()): |
|
time.sleep(3) |
|
continue |
|
if re.search(r"(not_found)", str(e), re.IGNORECASE): |
|
return 0 |
|
return 0 |
|
|
|
""" |
|
Helper functions for search result |
|
""" |
|
|
|
def getTotal(self, res): |
|
if isinstance(res["hits"]["total"], type({})): |
|
return res["hits"]["total"]["value"] |
|
return res["hits"]["total"] |
|
|
|
def getChunkIds(self, res): |
|
return [d["_id"] for d in res["hits"]["hits"]] |
|
|
|
def __getSource(self, res): |
|
rr = [] |
|
for d in res["hits"]["hits"]: |
|
d["_source"]["id"] = d["_id"] |
|
d["_source"]["_score"] = d["_score"] |
|
rr.append(d["_source"]) |
|
return rr |
|
|
|
def getFields(self, res, fields: list[str]) -> dict[str, dict]: |
|
res_fields = {} |
|
if not fields: |
|
return {} |
|
for d in self.__getSource(res): |
|
m = {n: d.get(n) for n in fields if d.get(n) is not None} |
|
for n, v in m.items(): |
|
if isinstance(v, list): |
|
m[n] = v |
|
continue |
|
if not isinstance(v, str): |
|
m[n] = str(m[n]) |
|
|
|
|
|
|
|
if m: |
|
res_fields[d["id"]] = m |
|
return res_fields |
|
|
|
def getHighlight(self, res, keywords: list[str], fieldnm: str): |
|
ans = {} |
|
for d in res["hits"]["hits"]: |
|
hlts = d.get("highlight") |
|
if not hlts: |
|
continue |
|
txt = "...".join([a for a in list(hlts.items())[0][1]]) |
|
if not is_english(txt.split()): |
|
ans[d["_id"]] = txt |
|
continue |
|
|
|
txt = d["_source"][fieldnm] |
|
txt = re.sub(r"[\r\n]", " ", txt, flags=re.IGNORECASE | re.MULTILINE) |
|
txts = [] |
|
for t in re.split(r"[.?!;\n]", txt): |
|
for w in keywords: |
|
t = re.sub(r"(^|[ .?/'\"\(\)!,:;-])(%s)([ .?/'\"\(\)!,:;-])" % re.escape(w), r"\1<em>\2</em>\3", t, |
|
flags=re.IGNORECASE | re.MULTILINE) |
|
if not re.search(r"<em>[^<>]+</em>", t, flags=re.IGNORECASE | re.MULTILINE): |
|
continue |
|
txts.append(t) |
|
ans[d["_id"]] = "...".join(txts) if txts else "...".join([a for a in list(hlts.items())[0][1]]) |
|
|
|
return ans |
|
|
|
def getAggregation(self, res, fieldnm: str): |
|
agg_field = "aggs_" + fieldnm |
|
if "aggregations" not in res or agg_field not in res["aggregations"]: |
|
return list() |
|
bkts = res["aggregations"][agg_field]["buckets"] |
|
return [(b["key"], b["doc_count"]) for b in bkts] |
|
|
|
""" |
|
SQL |
|
""" |
|
|
|
def sql(self, sql: str, fetch_size: int, format: str): |
|
logger.debug(f"ESConnection.sql get sql: {sql}") |
|
sql = re.sub(r"[ `]+", " ", sql) |
|
sql = sql.replace("%", "") |
|
replaces = [] |
|
for r in re.finditer(r" ([a-z_]+_l?tks)( like | ?= ?)'([^']+)'", sql): |
|
fld, v = r.group(1), r.group(3) |
|
match = " MATCH({}, '{}', 'operator=OR;minimum_should_match=30%') ".format( |
|
fld, rag_tokenizer.fine_grained_tokenize(rag_tokenizer.tokenize(v))) |
|
replaces.append( |
|
("{}{}'{}'".format( |
|
r.group(1), |
|
r.group(2), |
|
r.group(3)), |
|
match)) |
|
|
|
for p, r in replaces: |
|
sql = sql.replace(p, r, 1) |
|
logger.debug(f"ESConnection.sql to es: {sql}") |
|
|
|
for i in range(ATTEMPT_TIME): |
|
try: |
|
res = self.es.sql.query(body={"query": sql, "fetch_size": fetch_size}, format=format, |
|
request_timeout="2s") |
|
return res |
|
except ConnectionTimeout: |
|
logger.exception("ESConnection.sql timeout") |
|
continue |
|
except Exception: |
|
logger.exception("ESConnection.sql got exception") |
|
return None |
|
logger.error("ESConnection.sql timeout for 3 times!") |
|
return None |
|
|