from fastapi import FastAPI from fastapi.staticfiles import StaticFiles from fastapi.responses import FileResponse from transformers import AutoTokenizer, AutoModel import numpy as np from sklearn.metrics.pairwise import cosine_similarity # load model and tokenizer tokenizer = AutoTokenizer.from_pretrained('allenai/specter') model = AutoModel.from_pretrained('allenai/specter') # papers = [{'title': 'BERT', 'abstract': 'We introduce a new language representation model called BERT'}, # {'title': 'Attention is all you need', 'abstract': ' The dominant sequence transduction models are based on complex recurrent or convolutional neural networks'}] # concatenate title and abstract app = FastAPI() app.mount("/", StaticFiles(directory="static", html=True), name="static") @app.get("/") def index() -> FileResponse: return FileResponse(path="/app/static/index.html", media_type="text/html") @app.get('/similarity') def similarity(input): papers = input['papers'] title_abs = [d['title'] + tokenizer.sep_token + (d.get('abstract') or '') for d in papers] # preprocess the input inputs = tokenizer(title_abs, padding=True, truncation=True, return_tensors="pt", max_length=512) result = model(**inputs) # take the first token in the batch as the embedding embeddings = result.last_hidden_state[:, 0, :] res = cosine_similarity(embeddings, embeddings).tolist() return {"output": res}