:hugs: HF deploy

.github/workflows/deploy.yml

@@ -0,0 +1,20 @@
+name: Sync to Hugging Face hub
+on:
+  push:
+    branches: [main]
+
+  # to run this workflow manually from the Actions tab
+  workflow_dispatch:
+
+jobs:
+  sync-to-hub:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v3
+        with:
+          fetch-depth: 0
+          lfs: true
+      - name: Push to hub
+        env:
+          HF_TOKEN: ${{ secrets.HF_TOKEN }}
+        run: git push -f https://cboettig:[email protected]/spaces/boettiger-lab/sf_biodiv_access_shiny/ main

Dockerfile

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+FROM quay.io/jupyter/minimal-notebook:ubuntu-24.04
+
+USER root
+
+# R & RStudio
+RUN curl -s https://raw.githubusercontent.com/boettiger-lab/repo2docker-r/refs/heads/main/install_r.sh | bash
+RUN curl -s https://raw.githubusercontent.com/boettiger-lab/repo2docker-r/refs/heads/main/install_rstudio.sh | bash
+
+WORKDIR /code  
+COPY . .
+RUN Rscript install.r
+
+CMD ["R", "--quiet", "-e", "shiny::runApp(host='0.0.0.0', port=7860)"]

README.md

@@ -1,3 +1,12 @@
+---
+title: Sf Biodiv Access Shiny
+emoji: 📚
+colorFrom: blue
+colorTo: yellow
+sdk: docker
+pinned: false
+---
+
 # SF Biodiversity Access Shiny App
 
 This Shiny app provides decision support for the **Reimagining San Francisco Initiative**, aiming to explore the intersection of biodiversity, socio-economic variables, and greenspace accessibility.

install.r

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+install.packages(c("shinyjs",
+"shiny",
+"shinydashboard",
+"leaflet",
+"mapboxapi",
+"tidyverse",
+"tidycensus",
+"sf",
+"DT",
+"RColorBrewer",
+"terra",       
+"data.table",
+"mapview",   
+"sjPlot",    
+"sjlabelled",
+"bslib",
+"shinycssloaders"))