Alejandro Velez commited on
Commit
5854391
·
1 Parent(s): d194950

test removing .yml file and whl files

Browse files
Files changed (2) hide show
  1. environment.yml +0 -102
  2. requirements.txt +5 -5
environment.yml DELETED
@@ -1,102 +0,0 @@
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- name: diffdock
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- channels:
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- - pytorch
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- - defaults
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- dependencies:
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- - blas=1.0
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- - brotlipy=0.7.0
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- - bzip2=1.0.8
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- - ca-certificates=2022.07.19
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- - certifi=2022.9.14
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- - cffi=1.15.1
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- - charset-normalizer=2.0.4
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- - cryptography=37.0.1
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- - ffmpeg=4.3
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- - freetype=2.11.0
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- - gettext=0.21.0
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- - giflib=5.2.1
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- - gmp=6.2.1
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- - gnutls=3.6.15
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- - icu=58.2
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- - idna=3.3
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- - intel-openmp=2021.4.0
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- - jpeg=9e
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- - lame=3.100
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- - lcms2=2.12
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- - lerc=3.0
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- - libcxx=14.0.6
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- - libdeflate=1.8
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- - libffi=3.3
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- - libiconv=1.16
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- - libidn2=2.3.2
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- - libpng=1.6.37
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- - libtasn1=4.16.0
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- - libtiff=4.4.0
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- - libunistring=0.9.10
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- - libwebp=1.2.2
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- - libwebp-base=1.2.2
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- - libxml2=2.9.14
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- - llvm-openmp=14.0.6
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- - lz4-c=1.9.3
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- - mkl=2021.4.0
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- - mkl-service=2.4.0
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- - mkl_fft=1.3.1
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- - mkl_random=1.2.2
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- - ncurses=6.3
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- - nettle=3.7.3
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- - numpy=1.23.1
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- - numpy-base=1.23.1
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- - openh264=2.1.1
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- - openssl=1.1.1q
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- - pillow=9.2.0
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- - pip=22.2.2
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- - pycparser=2.21
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- - pyopenssl=22.0.0
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- - pysocks=1.7.1
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- - python=3.9.13
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- - pytorch=1.12.1
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- - readline=8.1.2
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- - requests=2.28.1
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- - setuptools=63.4.1
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- - six=1.16.0
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- - sqlite=3.39.3
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- - tk=8.6.12
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- - torchaudio=0.12.1
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- - torchvision=0.13.1
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- - typing_extensions=4.3.0
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- - tzdata=2022c
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- - urllib3=1.26.11
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- - wheel=0.37.1
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- - xz=5.2.6
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- - zlib=1.2.12
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- - zstd=1.5.2
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- - pip:
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- - biopandas==0.4.1
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- - biopython==1.79
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- - e3nn==0.5.0
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- - jinja2==3.1.2
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- - joblib==1.2.0
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- - markupsafe==2.1.1
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- - mpmath==1.2.1
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- - networkx==2.8.7
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- - opt-einsum==3.3.0
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- - opt-einsum-fx==0.1.4
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- - packaging==21.3
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- - pandas==1.5.0
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- - pyaml==21.10.1
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- - pyparsing==3.0.9
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- - python-dateutil==2.8.2
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- - pytz==2022.4
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- - pyyaml==6.0
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- - rdkit-pypi==2022.3.5
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- - scikit-learn==1.1.2
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- - scipy==1.9.1
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- - spyrmsd==0.5.2
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- - sympy==1.11.1
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- - threadpoolctl==3.1.0
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- - torch-cluster==1.6.0
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- - torch-geometric==2.1.0.post1
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- - torch-scatter==2.0.9
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- - torch-sparse==0.6.15
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- - torch-spline-conv==1.2.1
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- - tqdm==4.64.1
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
requirements.txt CHANGED
@@ -1,6 +1,6 @@
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  git+https://github.com/pyg-team/[email protected]
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- https://data.pyg.org/whl/torch-1.12.0%2Bcu113/torch_scatter-2.1.0%2Bpt112cu113-cp310-cp310-linux_x86_64.whl
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- https://data.pyg.org/whl/torch-1.12.0%2Bcu113/torch_sparse-0.6.16%2Bpt112cu113-cp310-cp310-linux_x86_64.whl
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- https://data.pyg.org/whl/torch-1.12.0%2Bcu113/torch_cluster-1.6.0%2Bpt112cu113-cp310-cp310-linux_x86_64.whl
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- https://data.pyg.org/whl/torch-1.12.0%2Bcu113/torch_spline_conv-1.2.1%2Bpt112cu113-cp310-cp310-linux_x86_64.whl
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- -f https://data.pyg.org/whl/torch-1.12.1+cu113.html
 
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  git+https://github.com/pyg-team/[email protected]
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+ # https://data.pyg.org/whl/torch-1.12.0%2Bcu113/torch_scatter-2.1.0%2Bpt112cu113-cp310-cp310-linux_x86_64.whl
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+ # https://data.pyg.org/whl/torch-1.12.0%2Bcu113/torch_sparse-0.6.16%2Bpt112cu113-cp310-cp310-linux_x86_64.whl
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+ # https://data.pyg.org/whl/torch-1.12.0%2Bcu113/torch_cluster-1.6.0%2Bpt112cu113-cp310-cp310-linux_x86_64.whl
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+ # https://data.pyg.org/whl/torch-1.12.0%2Bcu113/torch_spline_conv-1.2.1%2Bpt112cu113-cp310-cp310-linux_x86_64.whl
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+ # -f https://data.pyg.org/whl/torch-1.12.1+cu113.html