osbm commited on
Commit
f2c95e9
·
verified ·
1 Parent(s): 7c4ff58

Update app.py

Browse files
Files changed (1) hide show
  1. app.py +4 -3
app.py CHANGED
@@ -9,6 +9,7 @@ import numpy as np
9
  import shutil
10
  import os
11
  import openslide
 
12
 
13
  model = UNet(
14
  spatial_dims=2,
@@ -79,10 +80,10 @@ def process_slide(slide_path):
79
  slide = openslide.OpenSlide(os.path.join("cache_mrxs", slide_name))
80
 
81
  thumbnail = slide.get_thumbnail((512, 512))
82
-
83
- print(thumbnail.size)
84
 
85
- return thumbnail
 
 
86
 
87
 
88
  interface_slide = gr.Interface(
 
9
  import shutil
10
  import os
11
  import openslide
12
+ from project_utils.preprocessing import expand2square
13
 
14
  model = UNet(
15
  spatial_dims=2,
 
80
  slide = openslide.OpenSlide(os.path.join("cache_mrxs", slide_name))
81
 
82
  thumbnail = slide.get_thumbnail((512, 512))
 
 
83
 
84
+ image = expand2square(thumbnail)
85
+
86
+ return process_image(image)
87
 
88
 
89
  interface_slide = gr.Interface(