""" pdf text and asset extraction """ import json import random import re from pathlib import Path from typing import Dict, Any, Tuple from marker.converters.pdf import PdfConverter from marker.renderers.markdown import MarkdownRenderer from marker.models import create_model_dict from marker.output import text_from_rendered from marker.schema import BlockTypes from jinja2 import Template from src.state.poster_state import PosterState from utils.langgraph_utils import LangGraphAgent, extract_json, load_prompt from utils.src.logging_utils import log_agent_info, log_agent_success, log_agent_error, log_agent_warning from src.config.poster_config import load_config class Parser: def __init__(self): self.name = "parser" config_data = load_config() batch_config = config_data["pdf_processing"]["batch_sizes"] config = { "recognition_batch_size": batch_config["recognition"], "layout_batch_size": batch_config["layout"], "detection_batch_size": batch_config["detection"], "table_rec_batch_size": batch_config["table_rec"], "ocr_error_batch_size": batch_config["ocr_error"], "equation_batch_size": batch_config["equation"], "disable_tqdm": False, } self.converter = PdfConverter(artifact_dict=create_model_dict(), config=config) self.clean_pattern = re.compile(r"") self.enhanced_abt_prompt = load_prompt("config/prompts/narrative_abt_extraction.txt") self.visual_classification_prompt = load_prompt("config/prompts/classify_visuals.txt") self.title_authors_prompt = load_prompt("config/prompts/extract_title_authors.txt") self.section_extraction_prompt = load_prompt("config/prompts/extract_structured_sections.txt") def __call__(self, state: PosterState) -> PosterState: log_agent_info(self.name, "starting foundation building") try: output_dir = Path(state["output_dir"]) content_dir = output_dir / "content" assets_dir = output_dir / "assets" content_dir.mkdir(parents=True, exist_ok=True) assets_dir.mkdir(parents=True, exist_ok=True) # extract raw text and assets raw_text, raw_result = self._extract_raw_text(state["pdf_path"], content_dir) figures, tables = self._extract_assets(raw_result, state["poster_name"], assets_dir) # extract title and authors from raw text title, authors = self._extract_title_authors(raw_text, state["text_model"]) # generate narrative content narrative_content, inp_tok, out_tok = self._generate_narrative_content(raw_text, state["text_model"]) state["tokens"].add_text(inp_tok, out_tok) # classify visual assets by importance classified_visuals, inp_tok2, out_tok2 = self._classify_visual_assets(figures, tables, raw_text, state["text_model"]) state["tokens"].add_text(inp_tok2, out_tok2) # narrative metadata narrative_content["meta"] = { "poster_title": title, "authors": authors } # extract structured sections from raw text structured_sections = self._extract_structured_sections(raw_text, state["text_model"]) # save artifacts and update state self._save_content(narrative_content, "narrative_content.json", content_dir) self._save_content(classified_visuals, "classified_visuals.json", content_dir) self._save_content(structured_sections, "structured_sections.json", content_dir) self._save_raw_text(raw_text, content_dir) state["raw_text"] = raw_text state["structured_sections"] = structured_sections state["narrative_content"] = narrative_content state["classified_visuals"] = classified_visuals state["images"] = figures state["tables"] = tables state["current_agent"] = self.name log_agent_success(self.name, f"extracted raw text, {len(figures)} images, and {len(tables)} tables") log_agent_success(self.name, f"extracted title: {title}") log_agent_success(self.name, "generated enhanced abt narrative") log_agent_success(self.name, f"classified visuals: key={classified_visuals.get('key_visual', 'none')}, problem_ill={len(classified_visuals.get('problem_illustration', []))}, method_wf={len(classified_visuals.get('method_workflow', []))}, main_res={len(classified_visuals.get('main_results', []))}, comp_res={len(classified_visuals.get('comparative_results', []))}, support={len(classified_visuals.get('supporting', []))}") except Exception as e: log_agent_error(self.name, f"failed: {e}") state["errors"].append(str(e)) return state def _extract_raw_text(self, pdf_path: str, content_dir: Path) -> Tuple[str, Any]: log_agent_info(self.name, "converting pdf to raw text") document = self.converter.build_document(pdf_path) # create renderer and get rendered output from the existing document renderer = self.converter.resolve_dependencies(MarkdownRenderer) rendered = renderer(document) text, _, images = text_from_rendered(rendered) text = self.clean_pattern.sub("", text) (content_dir / "raw.md").write_text(text, encoding="utf-8") log_agent_info(self.name, f"extracted {len(text)} chars") raw_result = (document, rendered, images) return text, raw_result def _generate_narrative_content(self, text: str, config) -> Tuple[Dict, int, int]: log_agent_info(self.name, "generating abt narrative") agent = LangGraphAgent("expert poster design consultant", config) for attempt in range(3): try: prompt = Template(self.enhanced_abt_prompt).render(markdown_document=text) agent.reset() response = agent.step(prompt) narrative = extract_json(response.content) if "and" in narrative and "but" in narrative and "therefore" in narrative: return narrative, response.input_tokens, response.output_tokens except Exception as e: log_agent_warning(self.name, f"attempt {attempt + 1} failed: {e}") if attempt == 2: raise raise ValueError("failed to generate enhanced narrative after 3 attempts") def _save_content(self, content: Dict, filename: str, content_dir: Path): with open(content_dir / filename, 'w', encoding='utf-8') as f: json.dump(content, f, indent=2) def _save_raw_text(self, raw_text: str, content_dir: Path): with open(content_dir / "raw.md", 'w', encoding='utf-8') as f: f.write(raw_text) def _extract_assets(self, result, name: str, assets_dir: Path) -> Tuple[Dict, Dict]: log_agent_info(self.name, "extracting assets") document, rendered, marker_images = result caption_map = self._extract_captions(document) figures = {} tables = {} image_count = 0 table_count = 0 for img_name, pil_image in marker_images.items(): caption_info = caption_map.get(img_name, {'captions': [], 'block_type': 'Unknown'}) if 'table' in img_name.lower() or 'Table' in img_name or caption_info.get('block_type') == 'Table': table_count += 1 path = assets_dir / f"table-{table_count}.png" pil_image.save(path, "PNG") tables[str(table_count)] = { 'caption': caption_info['captions'][0] if caption_info['captions'] else f"Table {table_count}", 'path': str(path), 'width': pil_image.width, 'height': pil_image.height, 'aspect': pil_image.width / pil_image.height if pil_image.height > 0 else 1, } else: image_count += 1 path = assets_dir / f"figure-{image_count}.png" pil_image.save(path, "PNG") figures[str(image_count)] = { 'caption': caption_info['captions'][0] if caption_info['captions'] else f"Figure {image_count}", 'path': str(path), 'width': pil_image.width, 'height': pil_image.height, 'aspect': pil_image.width / pil_image.height if pil_image.height > 0 else 1, } with open(assets_dir / "figures.json", 'w', encoding='utf-8') as f: json.dump(figures, f, indent=2) with open(assets_dir / "tables.json", 'w', encoding='utf-8') as f: json.dump(tables, f, indent=2) with open(assets_dir / "fig_tab_caption_mapping.json", 'w', encoding='utf-8') as f: json.dump(caption_map, f, indent=2, ensure_ascii=False) return figures, tables def _extract_captions(self, document): caption_map = {} for page in document.pages: for block_id in page.structure: block = page.get_block(block_id) if block.block_type in [BlockTypes.FigureGroup, BlockTypes.TableGroup, BlockTypes.PictureGroup]: child_blocks = block.structure_blocks(page) figure_or_table = None captions = [] for child in child_blocks: child_block = page.get_block(child) if child_block.block_type in [BlockTypes.Figure, BlockTypes.Table, BlockTypes.Picture]: figure_or_table = child_block elif child_block.block_type in [BlockTypes.Caption, BlockTypes.Footnote]: captions.append(child_block.raw_text(document)) if figure_or_table: image_filename = f"{figure_or_table.id.to_path()}.jpeg" caption_map[image_filename] = { 'block_id': str(figure_or_table.id), 'block_type': str(figure_or_table.block_type), 'captions': captions, 'page': page.page_id } elif block.block_type in [BlockTypes.Figure, BlockTypes.Table, BlockTypes.Picture]: image_filename = f"{block.id.to_path()}.jpeg" if image_filename not in caption_map: nearby_captions = self._find_nearby_captions(page, block, document) caption_map[image_filename] = { 'block_id': str(block.id), 'block_type': str(block.block_type), 'captions': nearby_captions, 'page': page.page_id } return caption_map def _find_nearby_captions(self, page, target_block, document): captions = [] # Check all blocks on the page for captions for block_id in page.structure: block = page.get_block(block_id) if block.block_type in [BlockTypes.Caption, BlockTypes.Text]: caption_text = block.raw_text(document) # Look for figure/table keywords and check if it's nearby if any(keyword in caption_text for keyword in ['Figure', 'Table', 'Fig.']): captions.append(caption_text) # If no captions found, try previous/next blocks if not captions: for block in [page.get_prev_block(target_block), page.get_next_block(target_block)]: if block and block.block_type in [BlockTypes.Caption, BlockTypes.Text]: caption_text = block.raw_text(document) if any(keyword in caption_text for keyword in ['Figure', 'Table', 'Fig.']): captions.append(caption_text) return captions def _cleanup_unused_assets(self, output_dir: Path, name: str, images: Dict, tables: Dict): valid_paths = set() for img_data in images.values(): valid_paths.add(Path(img_data['path']).name) for table_data in tables.values(): valid_paths.add(Path(table_data['path']).name) for png_file in output_dir.glob(f"{name}-*.png"): if png_file.name not in valid_paths: png_file.unlink() def _extract_title_authors(self, text: str, config) -> Tuple[str, str]: """extract title and authors via llm api""" log_agent_info(self.name, "extracting title and authors with llm") agent = LangGraphAgent("expert academic paper parser", config) for attempt in range(3): try: prompt = Template(self.title_authors_prompt).render(markdown_document=text) agent.reset() response = agent.step(prompt) result = extract_json(response.content) if "title" in result and "authors" in result: title = result["title"].strip() authors = result["authors"].strip() # validate format if title and authors: return title, authors except Exception as e: log_agent_warning(self.name, f"title/authors extraction attempt {attempt + 1} failed: {e}") if attempt == 2: return "Untitled", "Authors not found" return "Untitled", "Authors not found" def _classify_visual_assets(self, figures: Dict, tables: Dict, raw_text: str, config) -> Tuple[Dict, int, int]: # combine all visuals for classification all_visuals = [] for fig_id, fig_data in figures.items(): all_visuals.append({ "id": f"figure_{fig_id}", "type": "figure", "caption": fig_data.get("caption", ""), "aspect_ratio": fig_data.get("aspect", 1.0) }) for tab_id, tab_data in tables.items(): all_visuals.append({ "id": f"table_{tab_id}", "type": "table", "caption": tab_data.get("caption", ""), "aspect_ratio": tab_data.get("aspect", 1.0) }) if not all_visuals: return {"key_visual": None, "problem_illustration": [], "method_workflow": [], "main_results": [], "comparative_results": [], "supporting": []}, 0, 0 log_agent_info(self.name, f"classifying {len(all_visuals)} visual assets") agent = LangGraphAgent("expert poster designer", config) for attempt in range(3): try: prompt = Template(self.visual_classification_prompt).render( visuals_list=json.dumps(all_visuals, indent=2) ) agent.reset() response = agent.step(prompt) classification = extract_json(response.content) # validate classification required_keys = ["key_visual", "problem_illustration", "method_workflow", "main_results", "comparative_results", "supporting"] if all(key in classification for key in required_keys): return classification, response.input_tokens, response.output_tokens except Exception as e: log_agent_warning(self.name, f"visual classification attempt {attempt + 1} failed: {e}") if attempt == 2: # fallback classification return self._fallback_visual_classification(all_visuals), 0, 0 return self._fallback_visual_classification(all_visuals), 0, 0 def _fallback_visual_classification(self, visuals): # simple rule-based fallback classification = {"key_visual": None, "main_results": [], "method_diagrams": [], "supporting": []} for visual in visuals: caption = visual.get("caption", "").lower() if "result" in caption or "performance" in caption or "comparison" in caption: classification["main_results"].append(visual["id"]) elif "method" in caption or "architecture" in caption or "framework" in caption: classification["method_diagrams"].append(visual["id"]) else: classification["supporting"].append(visual["id"]) # select key visual from main results or method diagrams if classification["main_results"]: classification["key_visual"] = classification["main_results"][0] elif classification["method_diagrams"]: classification["key_visual"] = classification["method_diagrams"][0] return classification def _extract_structured_sections(self, raw_text: str, config) -> Dict: """extract structured sections from raw paper text""" log_agent_info(self.name, "extracting structured sections from paper") agent = LangGraphAgent("expert paper section extractor", config) for attempt in range(3): try: prompt = Template(self.section_extraction_prompt).render(raw_text=raw_text) agent.reset() response = agent.step(prompt) structured_sections = extract_json(response.content) if self._validate_structured_sections(structured_sections): log_agent_success(self.name, f"extracted {len(structured_sections.get('paper_sections', []))} structured sections") return structured_sections else: log_agent_warning(self.name, f"attempt {attempt + 1}: invalid structured sections") except Exception as e: log_agent_warning(self.name, f"section extraction attempt {attempt + 1} failed: {e}") if attempt == 2: raise ValueError("failed to extract structured sections after multiple attempts") # fallback empty structure return { "paper_sections": [], "paper_structure": { "total_sections": 0, "foundation_sections": 0, "method_sections": 0, "evaluation_sections": 0, "conclusion_sections": 0 } } def _validate_structured_sections(self, structured_sections: Dict) -> bool: """validate structured sections format""" if "paper_sections" not in structured_sections: log_agent_warning(self.name, "validation error: missing 'paper_sections'") return False sections = structured_sections["paper_sections"] if not isinstance(sections, list) or len(sections) < 3: log_agent_warning(self.name, f"validation error: need at least 3 sections, got {len(sections)}") return False # validate each section for i, section in enumerate(sections): required_fields = ["section_name", "section_type", "content"] for field in required_fields: if field not in section: log_agent_warning(self.name, f"validation error: section {i} missing '{field}'") return False return True def parser_node(state: PosterState) -> PosterState: return Parser()(state)