tabula_sapiens_Uterus / accuracies.json
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{
"query_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| fibroblast | 681 | 0.97 | 0.74 | 0.97 | 0.93 | 0.00 | 0.90 | 0.93 | 0.94 | 0.98 |\n| endothelial cell | 437 | 0.99 | 0.98 | 0.98 | 0.99 | 0.00 | 0.98 | 0.99 | 0.99 | 0.99 |\n| vascular associated smooth muscle cell | 365 | 0.69 | 0.25 | 0.82 | 0.75 | 0.00 | 0.70 | 0.58 | 0.65 | 0.75 |\n| epithelial cell of uterus | 153 | 0.99 | 0.98 | 0.97 | 0.94 | 0.00 | 0.96 | 0.98 | 0.96 | 0.99 |\n| CD8-positive, alpha-beta T cell | 137 | 0.84 | 0.88 | 0.89 | 0.75 | 0.00 | 0.73 | 0.79 | 0.87 | 0.88 |\n| pericyte | 109 | 0.43 | 0.29 | 0.34 | 0.27 | 0.00 | 0.43 | 0.36 | 0.40 | 0.44 |\n| macrophage | 95 | 0.97 | 0.96 | 0.95 | 0.94 | 0.00 | 0.95 | 0.97 | 0.97 | 0.96 |\n| myometrial cell | 82 | 0.81 | 0.00 | 0.85 | 0.51 | 0.00 | 0.76 | 0.66 | 0.78 | 0.84 |\n| CD4-positive, alpha-beta T cell | 53 | 0.79 | 0.78 | 0.84 | 0.43 | 0.00 | 0.83 | 0.80 | 0.87 | 0.85 |\n| ciliated epithelial cell | 27 | 1.00 | 0.98 | 0.98 | 0.76 | 0.00 | 0.92 | 1.00 | 1.00 | 1.00 |\n| mature NK T cell | 15 | 0.49 | 0.43 | 0.48 | 0.45 | 0.00 | 0.54 | 0.49 | 0.53 | 0.59 |\n| neutrophil | 8 | 0.74 | 0.86 | 0.80 | 0.62 | 0.00 | 0.67 | 1.00 | 0.88 | 0.88 |\n| myofibroblast cell | 12 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.06 | 0.10 | 0.06 | 0.00 |\n| natural killer cell | 2 | 0.00 | 0.00 | 0.50 | 0.00 | 0.00 | 0.11 | 0.00 | 0.20 | 0.00 |\n| mast cell | 6 | 0.92 | 0.92 | 0.91 | 0.77 | 0.00 | 0.86 | 0.92 | 0.92 | 0.92 |\n| B cell | 6 | 0.73 | 0.80 | 0.91 | 0.60 | 0.00 | 0.77 | 1.00 | 1.00 | 1.00 |\n| T cell | 6 | 0.00 | 0.00 | 0.29 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| monocyte | 2 | 0.00 | 0.00 | 0.67 | 0.00 | 0.00 | 0.50 | 1.00 | 0.50 | 0.00 |\n| plasma cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.50 | 1.00 | 1.00 | 1.00 |\n| skeletal muscle satellite stem cell | 2 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| endothelial cell of lymphatic vessel | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| innate lymphoid cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| intermediate monocyte | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| adventitial cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| myeloid dendritic cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| epithelial fate stem cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| regulatory T cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |",
"ref_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| fibroblast | 5912 | 0.96 | 0.70 | 0.98 | 0.94 | 0.00 | 0.90 | 0.95 | 0.96 | 0.98 |\n| endothelial cell | 4260 | 0.99 | 0.98 | 0.99 | 0.99 | 0.00 | 0.98 | 0.99 | 0.99 | 1.00 |\n| vascular associated smooth muscle cell | 3230 | 0.66 | 0.06 | 0.86 | 0.82 | 0.00 | 0.74 | 0.68 | 0.72 | 0.81 |\n| epithelial cell of uterus | 1264 | 0.98 | 0.95 | 0.99 | 0.96 | 0.00 | 0.96 | 0.99 | 0.98 | 0.99 |\n| CD8-positive, alpha-beta T cell | 1204 | 0.85 | 0.84 | 0.90 | 0.85 | 0.00 | 0.85 | 0.93 | 0.95 | 0.94 |\n| pericyte | 924 | 0.44 | 0.22 | 0.52 | 0.46 | 0.00 | 0.52 | 0.54 | 0.56 | 0.61 |\n| macrophage | 834 | 0.96 | 0.95 | 0.97 | 0.96 | 0.00 | 0.96 | 0.98 | 0.98 | 0.97 |\n| myometrial cell | 835 | 0.85 | 0.00 | 0.89 | 0.66 | 0.00 | 0.83 | 0.78 | 0.86 | 0.90 |\n| CD4-positive, alpha-beta T cell | 385 | 0.75 | 0.68 | 0.82 | 0.63 | 0.00 | 0.86 | 0.92 | 0.93 | 0.88 |\n| ciliated epithelial cell | 293 | 0.98 | 0.86 | 0.98 | 0.86 | 0.00 | 0.97 | 0.99 | 0.99 | 0.99 |\n| mature NK T cell | 192 | 0.67 | 0.46 | 0.76 | 0.66 | 0.00 | 0.86 | 0.85 | 0.88 | 0.90 |\n| neutrophil | 95 | 0.89 | 0.91 | 0.94 | 0.93 | 0.00 | 0.90 | 0.99 | 0.98 | 0.98 |\n| myofibroblast cell | 89 | 0.00 | 0.00 | 0.21 | 0.12 | 0.00 | 0.20 | 0.42 | 0.53 | 0.33 |\n| natural killer cell | 90 | 0.00 | 0.00 | 0.47 | 0.38 | 0.00 | 0.51 | 0.87 | 0.91 | 0.78 |\n| mast cell | 59 | 0.94 | 0.94 | 0.96 | 0.92 | 0.00 | 0.90 | 0.98 | 0.94 | 0.96 |\n| B cell | 44 | 0.78 | 0.90 | 0.97 | 0.84 | 0.00 | 0.82 | 1.00 | 0.99 | 1.00 |\n| T cell | 41 | 0.00 | 0.00 | 0.24 | 0.13 | 0.00 | 0.55 | 1.00 | 0.99 | 0.85 |\n| monocyte | 19 | 0.00 | 0.00 | 0.43 | 0.00 | 0.00 | 0.77 | 0.95 | 0.97 | 0.48 |\n| plasma cell | 18 | 0.00 | 0.00 | 1.00 | 0.80 | 0.00 | 0.83 | 1.00 | 1.00 | 1.00 |\n| skeletal muscle satellite stem cell | 16 | 0.00 | 0.00 | 0.11 | 0.00 | 0.00 | 0.76 | 0.89 | 1.00 | 0.97 |\n| endothelial cell of lymphatic vessel | 5 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.29 | 0.77 | 1.00 | 0.33 |\n| innate lymphoid cell | 4 | 0.00 | 0.00 | 0.40 | 0.00 | 0.00 | 0.86 | 1.00 | 1.00 | 0.86 |\n| intermediate monocyte | 4 | 0.00 | 0.00 | 0.40 | 0.00 | 0.00 | 0.67 | 1.00 | 1.00 | 0.00 |\n| adventitial cell | 4 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.12 | 1.00 | 0.89 | 0.00 |\n| myeloid dendritic cell | 2 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 1.00 | 1.00 | 0.00 |\n| epithelial fate stem cell | 2 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.17 | 1.00 | 1.00 | 1.00 |\n| regulatory T cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.50 | 1.00 | 1.00 | 0.00 |"
}