tabula_sapiens_Prostate / accuracies.json
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{
"query_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| luminal cell of prostate epithelium | 1052 | 0.94 | 0.97 | 0.97 | 0.94 | 0.00 | 0.94 | 0.95 | 0.93 | 0.96 |\n| basal cell of prostate epithelium | 352 | 0.85 | 0.89 | 0.90 | 0.84 | 0.00 | 0.87 | 0.87 | 0.84 | 0.90 |\n| CD8-positive, alpha-beta T cell | 256 | 0.94 | 0.88 | 0.95 | 0.88 | 0.00 | 0.93 | 0.92 | 0.93 | 0.96 |\n| endothelial cell | 121 | 0.98 | 0.97 | 0.97 | 0.94 | 0.00 | 0.97 | 0.97 | 0.97 | 0.98 |\n| macrophage | 94 | 0.96 | 0.98 | 0.98 | 0.96 | 0.00 | 0.99 | 0.97 | 0.97 | 0.98 |\n| fibroblast | 59 | 0.96 | 0.95 | 0.97 | 0.84 | 0.00 | 0.94 | 0.95 | 0.94 | 0.97 |\n| mature NK T cell | 51 | 0.93 | 0.15 | 0.91 | 0.32 | 0.00 | 0.93 | 0.94 | 0.91 | 0.96 |\n| smooth muscle cell | 48 | 0.92 | 0.95 | 0.91 | 0.80 | 0.00 | 0.92 | 0.92 | 0.91 | 0.96 |\n| neutrophil | 23 | 0.98 | 0.98 | 0.98 | 0.89 | 0.00 | 0.96 | 0.96 | 1.00 | 0.98 |\n| erythrocyte | 21 | 0.85 | 0.91 | 0.95 | 0.95 | 0.00 | 0.83 | 0.98 | 0.93 | 0.98 |\n| CD4-positive, alpha-beta T cell | 13 | 0.11 | 0.00 | 0.25 | 0.00 | 0.00 | 0.44 | 0.39 | 0.53 | 0.24 |\n| B cell | 8 | 0.75 | 0.86 | 0.80 | 0.75 | 0.00 | 0.89 | 0.93 | 0.86 | 0.80 |\n| mast cell | 4 | 1.00 | 0.75 | 1.00 | 0.67 | 0.00 | 0.35 | 0.89 | 1.00 | 1.00 |\n| T cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |",
"ref_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| luminal cell of prostate epithelium | 9600 | 0.94 | 0.96 | 0.98 | 0.97 | 0.00 | 0.94 | 0.95 | 0.94 | 0.96 |\n| basal cell of prostate epithelium | 3143 | 0.85 | 0.87 | 0.94 | 0.91 | 0.00 | 0.87 | 0.89 | 0.86 | 0.90 |\n| CD8-positive, alpha-beta T cell | 2260 | 0.95 | 0.88 | 0.96 | 0.91 | 0.00 | 0.92 | 0.95 | 0.95 | 0.97 |\n| endothelial cell | 1084 | 0.98 | 0.92 | 0.98 | 0.96 | 0.00 | 0.97 | 0.98 | 0.97 | 0.99 |\n| macrophage | 928 | 0.98 | 0.98 | 0.98 | 0.98 | 0.00 | 0.99 | 0.99 | 0.99 | 0.99 |\n| fibroblast | 460 | 0.96 | 0.95 | 0.98 | 0.86 | 0.00 | 0.96 | 0.98 | 0.98 | 0.99 |\n| mature NK T cell | 436 | 0.91 | 0.18 | 0.92 | 0.54 | 0.00 | 0.92 | 0.92 | 0.93 | 0.95 |\n| smooth muscle cell | 429 | 0.93 | 0.91 | 0.97 | 0.83 | 0.00 | 0.94 | 0.97 | 0.97 | 0.99 |\n| neutrophil | 238 | 0.99 | 0.98 | 0.99 | 0.95 | 0.00 | 0.99 | 1.00 | 1.00 | 1.00 |\n| erythrocyte | 118 | 0.87 | 0.86 | 0.97 | 0.93 | 0.00 | 0.83 | 0.99 | 0.99 | 0.98 |\n| CD4-positive, alpha-beta T cell | 103 | 0.26 | 0.00 | 0.23 | 0.09 | 0.00 | 0.47 | 0.67 | 0.69 | 0.43 |\n| B cell | 93 | 0.82 | 0.82 | 0.84 | 0.90 | 0.00 | 0.92 | 0.99 | 0.98 | 0.97 |\n| mast cell | 22 | 1.00 | 0.64 | 0.98 | 0.68 | 0.00 | 0.38 | 0.98 | 0.98 | 1.00 |\n| T cell | 13 | 0.00 | 0.00 | 0.25 | 0.00 | 0.00 | 0.75 | 0.96 | 0.67 | 0.83 |"
}