| name ambient_short_members_dev | |
| seed 100 | |
| numPairTransformLayers 8 | |
| warmupEpoches 45 | |
| numEpoches 360 | |
| motifProbability 1.0 | |
| logEverySteps 1000 | |
| checkpointEveryEpoches 1 | |
| batchSize 8 | |
| accum_grad 2 | |
| learningRate 10e-4 | |
| ambient True | |
| t_nature 300 | |
| plddt_to_timestep ((90,-50),(80,300),(70,900)) | |
| dt_buffer 50 | |
| dataDirectory /scratch/projects/cgai/ambient_proteins/cluster/datasets/1300K/afdb/repr/cluster_alntype1_tm40_alncov75_021425_021425_cluster | |
| always_ambient_for_high_noises True | |
| cluster_dataset /scratch/projects/cgai/ambient_proteins/cluster/datasets/1300K/csv/cluster_alntype1_tm40_alncov75_021425_021425_cluster_afdb.csv | |
| samples_per_cluster 1 | |