diff --git a/1D/.DS_Store b/1D/.DS_Store new file mode 100644 index 0000000000000000000000000000000000000000..db7c119304363ce3c0d2090c530755ed00d88d63 Binary files /dev/null and b/1D/.DS_Store differ diff --git a/1D/ES-E14_CAGE/.DS_Store b/1D/ES-E14_CAGE/.DS_Store new file mode 100644 index 0000000000000000000000000000000000000000..1df2154dfb5fda512e3481bb3a999dec3426f00a Binary files /dev/null and b/1D/ES-E14_CAGE/.DS_Store differ diff --git a/1D/ES-E14_CAGE/GSM3852792_mESC_CAGE_n1.ctss.bed b/1D/ES-E14_CAGE/GSM3852792_mESC_CAGE_n1.ctss.bed new file mode 100644 index 0000000000000000000000000000000000000000..fe9b79bdca5671fe7d0087fffbfdcc95bb48f261 --- /dev/null +++ b/1D/ES-E14_CAGE/GSM3852792_mESC_CAGE_n1.ctss.bed @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:31e445768159a084094b35d520b947876aa37746abcc4e04db64f37b8c1c1fa9 +size 139018800 diff --git a/1D/ES-E14_CAGE/GSM3852792_mESC_CAGE_n1.ctss.bed.gz b/1D/ES-E14_CAGE/GSM3852792_mESC_CAGE_n1.ctss.bed.gz new file mode 100644 index 0000000000000000000000000000000000000000..41e4e5dcbb8ca0c032bd1463c2a9edcf1a3e101e --- /dev/null +++ b/1D/ES-E14_CAGE/GSM3852792_mESC_CAGE_n1.ctss.bed.gz @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:959e3c91198e6487e325f75e2c91b5103759a4907a9feef4e10cd0ab941ceb13 +size 22969332 diff --git a/1D/ES-E14_CAGE/GSM3852793_mESC_CAGE_n2.ctss.bed b/1D/ES-E14_CAGE/GSM3852793_mESC_CAGE_n2.ctss.bed new file mode 100644 index 0000000000000000000000000000000000000000..6f2ca1a496349896b101fb5240125379c53f3c67 --- /dev/null +++ b/1D/ES-E14_CAGE/GSM3852793_mESC_CAGE_n2.ctss.bed @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:fbcf281d019859b21fdc4cb3ccf3d82271d2cab03e32bcd4b7fb84f58f6f5f9d +size 76413443 diff --git a/1D/ES-E14_CAGE/GSM3852793_mESC_CAGE_n2.ctss.bed.gz b/1D/ES-E14_CAGE/GSM3852793_mESC_CAGE_n2.ctss.bed.gz new file mode 100644 index 0000000000000000000000000000000000000000..7c98b93756b2b4b08710e3f12f58362c819001c8 --- /dev/null +++ b/1D/ES-E14_CAGE/GSM3852793_mESC_CAGE_n2.ctss.bed.gz @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:5613d6862ef0a4a1f87f32612fd6a5456a4fd2481a106d237751da5ba152b790 +size 12616771 diff --git a/1D/ES-E14_CAGE/GSM3852794_mESC_CAGE_n3.ctss.bed b/1D/ES-E14_CAGE/GSM3852794_mESC_CAGE_n3.ctss.bed new file mode 100644 index 0000000000000000000000000000000000000000..1faa9d49fe79a845c9cdb2c7f9acef00a7c6c19b --- /dev/null +++ b/1D/ES-E14_CAGE/GSM3852794_mESC_CAGE_n3.ctss.bed @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:e857b61dfbd00c0058e7cd64138b5674db3046c9382430b0ab6f72e8b9dcb4b1 +size 85152646 diff --git a/1D/ES-E14_CAGE/GSM3852794_mESC_CAGE_n3.ctss.bed.gz b/1D/ES-E14_CAGE/GSM3852794_mESC_CAGE_n3.ctss.bed.gz new file mode 100644 index 0000000000000000000000000000000000000000..e5ab6881eb8343689870b932b1f8d50ceaff28be --- /dev/null +++ b/1D/ES-E14_CAGE/GSM3852794_mESC_CAGE_n3.ctss.bed.gz @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:1c06fb28133dc66b649d2d5448f49e997dc3054adaa5917ea5f5949a152399bf +size 14084778 diff --git a/1D/ES-E14_DNase-seq/ENCFF754ILF.bam b/1D/ES-E14_DNase-seq/ENCFF754ILF.bam new file mode 100644 index 0000000000000000000000000000000000000000..c16902643ca3ed081af033f1c5a2c3502bf7f639 --- /dev/null +++ b/1D/ES-E14_DNase-seq/ENCFF754ILF.bam @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:677370135626c51558ff3c058672ea4f35769cc43298774b9d2655e65377e214 +size 1549727845 diff --git a/1D/ES-E14_DNase-seq/ENCFF754ILF_unnorm.bigWig b/1D/ES-E14_DNase-seq/ENCFF754ILF_unnorm.bigWig new file mode 100644 index 0000000000000000000000000000000000000000..d31d899ad803e2759300c352bec1e0f3fba8860c --- /dev/null +++ b/1D/ES-E14_DNase-seq/ENCFF754ILF_unnorm.bigWig @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:9858399b03570c32ec2a34b2dac67cff12e1913e685985bb6ddb9033f8c496a7 +size 563525623 diff --git a/1D/ES-E14_DNase-seq/ENCFF785XJZ.bam b/1D/ES-E14_DNase-seq/ENCFF785XJZ.bam new file mode 100644 index 0000000000000000000000000000000000000000..6a51f417904c35fc11e106b85e1bd2ff273826b2 --- /dev/null +++ b/1D/ES-E14_DNase-seq/ENCFF785XJZ.bam @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:dd632c0bdf78a60c1a04c40bde6295f28dd2c62b4b32932c234b76681ade64bc +size 1205405452 diff --git a/1D/ES-E14_DNase-seq/ENCFF785XJZ_unnorm.bigWig b/1D/ES-E14_DNase-seq/ENCFF785XJZ_unnorm.bigWig new file mode 100644 index 0000000000000000000000000000000000000000..70fefab97b540286bc76f2185ab8530ba7b7e951 --- /dev/null +++ b/1D/ES-E14_DNase-seq/ENCFF785XJZ_unnorm.bigWig @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:41907972d83cfc85e1c14a68eec14587cbc69516d1391114290ff9f48130e91d +size 530924007 diff --git a/1D/ES-E14_H3K27ac/ENCFF163HEV.bigWig b/1D/ES-E14_H3K27ac/ENCFF163HEV.bigWig new file mode 100644 index 0000000000000000000000000000000000000000..274254dba95d3dd147cbdddbdb77475424891994 --- /dev/null +++ b/1D/ES-E14_H3K27ac/ENCFF163HEV.bigWig @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:fdafbbd22b71c424c7d4770800fd1b062ddd9582d060cd89ecbe53aeffd1c810 +size 373069033 diff --git a/1D/ES-E14_H3K4me3/ENCFF240MDV.bigWig b/1D/ES-E14_H3K4me3/ENCFF240MDV.bigWig new file mode 100644 index 0000000000000000000000000000000000000000..677392738845f160a87233f1a5268d9ae8a6eff0 --- /dev/null +++ b/1D/ES-E14_H3K4me3/ENCFF240MDV.bigWig @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:05b0e771f0304bb898115e09b0902c238d464f1a42eed3ef8b25ebf501420094 +size 570843707 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1.bam b/1D/GM12878_CAGE/ENCFF915EIJ_1.bam new file mode 100644 index 0000000000000000000000000000000000000000..0e41e075f25ed00790446355bd331fe82d2cf909 --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1.bam @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:fc5881fb250768278c75ffabd3da2ddaa054ffc6abcc994ccfa6a163f58afa99 +size 1060041875 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1.bam.bai b/1D/GM12878_CAGE/ENCFF915EIJ_1.bam.bai new file mode 100644 index 0000000000000000000000000000000000000000..148dcbc8b3cc1b2cbe5d42c6d0b6d2b392c41cc8 --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1.bam.bai @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:9eeafb3da724e75169e39c53b1105c408f42dd7b58876854b2347eba4a24f2ac +size 4343776 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC.bigWig b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC.bigWig new file mode 100644 index 0000000000000000000000000000000000000000..0b6f9ff7df060d3f04000aac57c7204a852db2dd --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC.bigWig @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:c636776b5f675182df232475e1883570dc85517329d86e09260644e09707caa8 +size 3402191 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC.h5 b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC.h5 new file mode 100644 index 0000000000000000000000000000000000000000..4feddb9944ba89e7584ce7461d66311cf578298f --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:6003608c6abec606bf5ee4d35a3846743eafa3c7c386a904728968e0e3c29541 +size 1400 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr1.h5 b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr1.h5 new file mode 100644 index 0000000000000000000000000000000000000000..1d68d7f1ff99c67d814753a02d6a458dee0be923 --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr1.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:0ca9277b8e4f4be506f9f80e68aa123c4896621f7d8121d3fe294d556ebab22f +size 101748 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr10.h5 b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr10.h5 new file mode 100644 index 0000000000000000000000000000000000000000..90bd433dff5890c08f9ee16eef3ce42f2ebb6d5b --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr10.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:cb45e0efa7fc313666b7b3bdc2fbffcd8b9de60c6bcfa844eb91c9b5653fa817 +size 56260 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr11.h5 b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr11.h5 new file mode 100644 index 0000000000000000000000000000000000000000..bf67dd5780e45c390f7504f086add492a0929873 --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr11.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:93c32af0bf261fc62799552e736b2d424223864124acf1840acf570230bfbbc3 +size 56050 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr12.h5 b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr12.h5 new file mode 100644 index 0000000000000000000000000000000000000000..ab474bf5a8ff28b8fdbd5c537eb33b39be2445aa --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr12.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:d10fa31f236b602c427e542494ffe2b5b692a0b7c5fc70c3bfe30c954cbec1ec +size 55588 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr13.h5 b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr13.h5 new file mode 100644 index 0000000000000000000000000000000000000000..14b14bdd1c6b43243b4a15bb852cfe47f0336685 --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr13.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:fbf97c76e014aef798a2aa10d595b69e19857b23ed95d24b09c76d37aa5658c2 +size 48114 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr14.h5 b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr14.h5 new file mode 100644 index 0000000000000000000000000000000000000000..2e9a52a07e2dcf17e5de5e4c5e8b8a346752e812 --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr14.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:ed657540978059cd8e8c9ecf548233e1c0f7a10e31781744a761a9ec0b970abd +size 44986 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr15.h5 b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr15.h5 new file mode 100644 index 0000000000000000000000000000000000000000..3bfe71bfe0a8779735e33b2481506693f6705820 --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr15.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:d91b33cc7547d03c67f908f3c5bb75b14d181e14dd1866054df2e0397e311368 +size 43060 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr16.h5 b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr16.h5 new file mode 100644 index 0000000000000000000000000000000000000000..560770ae24b76b67f18f9ea8e4edee5571759d43 --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr16.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:31552a6ce78b8e89d9fef1f28e4b2af93f8d47dc367210687ecf979881f5de7e +size 38188 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr17.h5 b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr17.h5 new file mode 100644 index 0000000000000000000000000000000000000000..9d1b62c140f7f55af0de8ddcdca01a29db59902c --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr17.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:138c61ac03daa74c33dda39fd6989cb8fe348a8ebd830124d8021eb1ab483fa0 +size 34526 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr18.h5 b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr18.h5 new file mode 100644 index 0000000000000000000000000000000000000000..e24c9344c6d8ef9184881c3f4425a0fb9ef17134 --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr18.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:f6412ca8378dbf7cfcc6d75361657e8dd921202358a43fc4970c3b4a85de6435 +size 33278 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr19.h5 b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr19.h5 new file mode 100644 index 0000000000000000000000000000000000000000..69285319c565c379c2d8a65051bd3c247ae2aa2b --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr19.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:4f26aebf8e6830fee430b5e91de5d9c3bbdc58a626dc6e4bbf68c651cfca5818 +size 25698 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr2.h5 b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr2.h5 new file mode 100644 index 0000000000000000000000000000000000000000..a8930e393e460b6148ce75225301badec2401e18 --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr2.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:96dfa82a41ec3a7e031fa1198e97f7dc40509f14b812ae35ae0dcd2850e5be8f +size 99326 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr20.h5 b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr20.h5 new file mode 100644 index 0000000000000000000000000000000000000000..d81a9e7a9f065808fa8a65b72bd1033d588f2c9a --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr20.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:06fa1022634a8f5402dfe0f49ecccc56b949d14f9d401a7e7c1c91092c9bb203 +size 27258 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr21.h5 b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr21.h5 new file mode 100644 index 0000000000000000000000000000000000000000..7fb6cce0f65b98642203f1d9daa427bce14fbdc3 --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr21.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:a4191616bb5aef975bd6f05a34bdf006632a7efbcca79b96c8f5f6588b3237dc +size 21298 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr22.h5 b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr22.h5 new file mode 100644 index 0000000000000000000000000000000000000000..60c50f1524e1929e50bae7ba2788eb7e94809a45 --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr22.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:86f695fee720e2f12fb8e67f7e49a2994f823a0ea3e88749e7096df7661741f5 +size 22568 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr3.h5 b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr3.h5 new file mode 100644 index 0000000000000000000000000000000000000000..3d127db70620a716135bbc16a0f9a4b810183b19 --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr3.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:49ade873eaf9ded79b8a2aea41eee11550774e28d09a71fcbe72acf2f10fe383 +size 81256 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr4.h5 b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr4.h5 new file mode 100644 index 0000000000000000000000000000000000000000..6f1d2623d6ea17226352f639de4c0f377c40a7c6 --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr4.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:f98dbff10406f8bb0b1b3773ccae999e58411f84b6d1367ca556433cc11e6ff2 +size 78508 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr5.h5 b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr5.h5 new file mode 100644 index 0000000000000000000000000000000000000000..1cac279fe4080e0dbf02eda92d934c7273fd4be5 --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr5.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:04259b78313e492d3e861003878be99077e7385899a5a0840f1e5643c139dfd7 +size 74414 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr6.h5 b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr6.h5 new file mode 100644 index 0000000000000000000000000000000000000000..0148236f1c4d9d120fdb8a483a37ca513ccfa5fd --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr6.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:e3d06036709fae63bc3e3b85dc5e1d79b68237f1fe42c503d01c493c2717fdcc +size 70494 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr7.h5 b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr7.h5 new file mode 100644 index 0000000000000000000000000000000000000000..2644a51d10a8391f6ab063071e821fda9d6c4528 --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr7.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:305044922ac0b703f1bd43a716b50e8743e4777069822649b1b8a88127cbe53d +size 65702 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr8.h5 b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr8.h5 new file mode 100644 index 0000000000000000000000000000000000000000..21c61ff18cddb809bfca731eda2d3cc2a3f00ff6 --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr8.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:b6430655e9b45a5f408c47ee3236a64d39d4f89d97ae282b65e4c2df81d34662 +size 60592 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr9.h5 b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr9.h5 new file mode 100644 index 0000000000000000000000000000000000000000..b2d8c6da0b722df9a00d9a7b841235269b840865 --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chr9.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:afe447f32efa2f8e27ac7355d22dfe1201fea3f6c1cbf48e580dc8a6443b909a +size 58532 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chrX.h5 b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chrX.h5 new file mode 100644 index 0000000000000000000000000000000000000000..8260b6248878371f5ab018c0e9151b99c72040fb --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_1_RPGC_chrX.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:02cdfdb9568f76eea900ec4b3e3e034612e26da727a7d2dfb65de9d121239e01 +size 64156 diff --git a/1D/GM12878_CAGE/ENCFF915EIJ_unnorm.bigWig b/1D/GM12878_CAGE/ENCFF915EIJ_unnorm.bigWig new file mode 100644 index 0000000000000000000000000000000000000000..433ba2db37e06ea3f59b3ad1400cc652474da46f --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF915EIJ_unnorm.bigWig @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:ef380cecc7cc4fb4a65edd41cf8bef933aeac2b3f34eb7a74056b9d6e7a83355 +size 65245999 diff --git a/1D/GM12878_CAGE/ENCFF990KLZ_2.bam b/1D/GM12878_CAGE/ENCFF990KLZ_2.bam new file mode 100644 index 0000000000000000000000000000000000000000..7f9a2571804ad4e8e965966bfdc25c07e8d30c54 --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF990KLZ_2.bam @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:a3524585ec26045216bec56b36a99723ac1bd9643610024444e736036379c979 +size 1170187707 diff --git a/1D/GM12878_CAGE/ENCFF990KLZ_unnorm.bigWig b/1D/GM12878_CAGE/ENCFF990KLZ_unnorm.bigWig new file mode 100644 index 0000000000000000000000000000000000000000..09547a2200ebf72d3454cc71c3482f6da312cc3d --- /dev/null +++ b/1D/GM12878_CAGE/ENCFF990KLZ_unnorm.bigWig @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:fb9e47056194e5b29aa0cf3d7ce12811077c975e4d27abf22ede211b9a38bd99 +size 66862518 diff --git a/1D/GM12878_DNase-seq/ENCFF775ZJX.bam b/1D/GM12878_DNase-seq/ENCFF775ZJX.bam new file mode 100644 index 0000000000000000000000000000000000000000..46b66bf75760208620a82dd97420ef9eae93b764 --- /dev/null +++ b/1D/GM12878_DNase-seq/ENCFF775ZJX.bam @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:9e02d832e01a2cefae4d72fc8efb1ef6c64fa5077441d1f8d581241c502c6d53 +size 1231646261 diff --git a/1D/GM12878_DNase-seq/ENCFF775ZJX_unnorm.bigWig b/1D/GM12878_DNase-seq/ENCFF775ZJX_unnorm.bigWig new file mode 100644 index 0000000000000000000000000000000000000000..2b2b2319cd0ac9613675a0ccb93dc88ab492cec7 --- /dev/null +++ b/1D/GM12878_DNase-seq/ENCFF775ZJX_unnorm.bigWig @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:34c0f41e7759c333ac5c4d95716c09015dd4776bdd916cdc2bc701f0e0abf00c +size 406517687 diff --git a/1D/GM12878_DNase-seq/ENCFF783ZLL.bam b/1D/GM12878_DNase-seq/ENCFF783ZLL.bam new file mode 100644 index 0000000000000000000000000000000000000000..9ae12cbfe174aec4ac2dc0c534e829ffa123d14f --- /dev/null +++ b/1D/GM12878_DNase-seq/ENCFF783ZLL.bam @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:370e13e7cb80d9e451977706c8b3e955343071551b3b501a82a66942a7e29295 +size 2208801021 diff --git a/1D/GM12878_DNase-seq/ENCFF783ZLL_unnorm.bigWig b/1D/GM12878_DNase-seq/ENCFF783ZLL_unnorm.bigWig new file mode 100644 index 0000000000000000000000000000000000000000..9fa126064c9a24d6aa4bbb19d3c06da386147666 --- /dev/null +++ b/1D/GM12878_DNase-seq/ENCFF783ZLL_unnorm.bigWig @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:877b9547d984cde39033feb115f321e959a4f847b6ce7ee9509e836748d6974e +size 625746947 diff --git a/1D/GM12878_H3K27ac/ENCFF180LKW.bigWig b/1D/GM12878_H3K27ac/ENCFF180LKW.bigWig new file mode 100644 index 0000000000000000000000000000000000000000..d8bd3ea9fd09f985856b3f764a74701613a321a7 --- /dev/null +++ b/1D/GM12878_H3K27ac/ENCFF180LKW.bigWig @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:324711ea363af3a3bdffa10c2f452661dceb9dd334ab9da2a2a585e4d64362c6 +size 177723272 diff --git a/1D/GM12878_H3K27ac/ENCFF197QHX.bam b/1D/GM12878_H3K27ac/ENCFF197QHX.bam new file mode 100644 index 0000000000000000000000000000000000000000..c80d42b1e4cb22dee5afa57f322838ce7a6390a1 --- /dev/null +++ b/1D/GM12878_H3K27ac/ENCFF197QHX.bam @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:502c6e7b56fa01feb71a525288784518e69f6f79c676995918e8b4a084c57060 +size 356414654 diff --git a/1D/GM12878_H3K27ac/ENCFF882PRP.bam b/1D/GM12878_H3K27ac/ENCFF882PRP.bam new file mode 100644 index 0000000000000000000000000000000000000000..2f67f1c10a8faf3c343bf9c6048a57458a26e3ec --- /dev/null +++ b/1D/GM12878_H3K27ac/ENCFF882PRP.bam @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:f5d82e03e6742ffed9fcde25cefed2ac13e9fdd2849045626b45f7d76b5bc7e1 +size 301201986 diff --git a/1D/GM12878_H3K4me3/ENCFF342CXS.bam b/1D/GM12878_H3K4me3/ENCFF342CXS.bam new file mode 100644 index 0000000000000000000000000000000000000000..880ead737d821a7d13066193fbb7c799c0106a6f --- /dev/null +++ b/1D/GM12878_H3K4me3/ENCFF342CXS.bam @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:fc63ac134c4d4b0349b2683c4bc22de49e04b940725fd521b564438e86e85fad +size 750471053 diff --git a/1D/GM12878_H3K4me3/ENCFF818GNV_ENCODE3.bigWig b/1D/GM12878_H3K4me3/ENCFF818GNV_ENCODE3.bigWig new file mode 100644 index 0000000000000000000000000000000000000000..a8121fd37bd4d45ed4c05e66b7275a6f4be9e39a --- /dev/null +++ b/1D/GM12878_H3K4me3/ENCFF818GNV_ENCODE3.bigWig @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:b062a8fe243e1148393c0b25e0bb104069067e5bb5cba9b09a0cbdd6d76d3635 +size 1633538601 diff --git a/1D/GM12878_H3K4me3/ENCFF818UQV.bam b/1D/GM12878_H3K4me3/ENCFF818UQV.bam new file mode 100644 index 0000000000000000000000000000000000000000..af6a8493c824f5b5f55f5ef56d893857c836166d --- /dev/null +++ b/1D/GM12878_H3K4me3/ENCFF818UQV.bam @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:cf99fb3f894a440939925819303715d27db7c90319bfb4d3019817fb2890b7f9 +size 635413588 diff --git a/1D/H1_CAGE/ENCFF521WGM.bigWig b/1D/H1_CAGE/ENCFF521WGM.bigWig new file mode 100644 index 0000000000000000000000000000000000000000..003a98c75f3d0088dee1b4b5f8a9f3db36cd5de7 --- /dev/null +++ b/1D/H1_CAGE/ENCFF521WGM.bigWig @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:818327699e3aea16d5d6c6768d09414b55a28db99f20a5a7ffaa10ae9361670a +size 69322004 diff --git a/1D/H1_CAGE/ENCFF521WGM_2.bam b/1D/H1_CAGE/ENCFF521WGM_2.bam new file mode 100644 index 0000000000000000000000000000000000000000..75772eff9576912b39dcd4b92c0ed7138109eeb0 --- /dev/null +++ b/1D/H1_CAGE/ENCFF521WGM_2.bam @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:3daf5a54702e64cd89ca6048db7b903d049c6f524025e646a4a0fdd29cba6cb9 +size 1197284037 diff --git a/1D/H1_CAGE/ENCFF525HJR.bigWig b/1D/H1_CAGE/ENCFF525HJR.bigWig new file mode 100644 index 0000000000000000000000000000000000000000..b0e72aa1c54b0e73871f5ab8c98379334489211b --- /dev/null +++ b/1D/H1_CAGE/ENCFF525HJR.bigWig @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:6fcba3ef2027541aa109d946cad549b210cdd2e2bed9ceccec40114cde292aee +size 62159937 diff --git a/1D/H1_CAGE/ENCFF525HJR_1.bam b/1D/H1_CAGE/ENCFF525HJR_1.bam new file mode 100644 index 0000000000000000000000000000000000000000..5802f84eb95d503e2fa3f1aa177b66b50e8b106e --- /dev/null +++ b/1D/H1_CAGE/ENCFF525HJR_1.bam @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:d00706bccb36477d2ed34a49839e5487880a2e7286358341734dae17e025afb1 +size 1198969165 diff --git a/1D/H1_DNase-seq/ENCFF131HMO.bigWig b/1D/H1_DNase-seq/ENCFF131HMO.bigWig new file mode 100644 index 0000000000000000000000000000000000000000..c9ef62667a53a0844c622819bbd28ef2e49bf456 --- /dev/null +++ b/1D/H1_DNase-seq/ENCFF131HMO.bigWig @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:2d85bd05ba462d64af580da8bb9f0d83ac916d41339cea842f762baeec5fc889 +size 561271965 diff --git a/1D/H1_DNase-seq/ENCFF546PJU.bam b/1D/H1_DNase-seq/ENCFF546PJU.bam new file mode 100644 index 0000000000000000000000000000000000000000..0ca3e6e60a9fd36172fc2096951a9133fb124496 --- /dev/null +++ b/1D/H1_DNase-seq/ENCFF546PJU.bam @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:12c38e7cc4815afda426baade3abf19ebfeef4d96e22ba92cc8589bd7ae0df90 +size 1109858562 diff --git a/1D/H1_H3K27ac/ENCFF693IFG.bam b/1D/H1_H3K27ac/ENCFF693IFG.bam new file mode 100644 index 0000000000000000000000000000000000000000..761f2b52e58ace48abbaa26888e0e42841fed063 --- /dev/null +++ b/1D/H1_H3K27ac/ENCFF693IFG.bam @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:918af46c3a8a888adbbab3222dae8553ef4c684d222d12b92a59797496ed1127 +size 446167653 diff --git a/1D/H1_H3K27ac/ENCFF860ABR.bam b/1D/H1_H3K27ac/ENCFF860ABR.bam new file mode 100644 index 0000000000000000000000000000000000000000..8d205711fca23eb4382e9200dc300758ae7d9d08 --- /dev/null +++ b/1D/H1_H3K27ac/ENCFF860ABR.bam @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:649eebafb17c4a4f72425525d4e737ac880325dc42227186b327bf07b67c264a +size 667513621 diff --git a/1D/H1_H3K27ac/ENCFF919FBG.bigWig b/1D/H1_H3K27ac/ENCFF919FBG.bigWig new file mode 100644 index 0000000000000000000000000000000000000000..4abac3d88aba0a9b12ed5346ea4d84a0eb434ea6 --- /dev/null +++ b/1D/H1_H3K27ac/ENCFF919FBG.bigWig @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:a5e53d9607cd3bb7170440416e023e2b032a1a8801927d03c731181dc33d6011 +size 1688015800 diff --git a/1D/H1_H3K4me3/ENCFF151CFM.bam b/1D/H1_H3K4me3/ENCFF151CFM.bam new file mode 100644 index 0000000000000000000000000000000000000000..c8f4174174e032dacd17d5779a66ee9296a5afa7 --- /dev/null +++ b/1D/H1_H3K4me3/ENCFF151CFM.bam @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:f496928c3df43e58860fff81f904276f72b5655892730079c8f116a63b3e6847 +size 947613418 diff --git a/1D/H1_H3K4me3/ENCFF760NUN.bigWig b/1D/H1_H3K4me3/ENCFF760NUN.bigWig new file mode 100644 index 0000000000000000000000000000000000000000..c80de5653b554419fe008d4f76221ea391e06510 --- /dev/null +++ b/1D/H1_H3K4me3/ENCFF760NUN.bigWig @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:3571e9c148cca9930e26929cc118f85d712b1f9b7ed7e2ea9393f58316cc8007 +size 2573397048 diff --git a/1D/H1_H3K4me3/ENCFF765FFD.bam b/1D/H1_H3K4me3/ENCFF765FFD.bam new file mode 100644 index 0000000000000000000000000000000000000000..4cc59054217bfc8b61a0821be0b3558d088dd552 --- /dev/null +++ b/1D/H1_H3K4me3/ENCFF765FFD.bam @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:c524756e0b6f3ecc5e10ca793fed8b968506d58aef30bb841f4cabf46163d59b +size 1670243988 diff --git a/1D/K562_CAGE/ENCFF623BZZ.bigWig b/1D/K562_CAGE/ENCFF623BZZ.bigWig new file mode 100644 index 0000000000000000000000000000000000000000..736ff95b6129e435682c6aab1d82ea88c204709b --- /dev/null +++ b/1D/K562_CAGE/ENCFF623BZZ.bigWig @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:f091a784d5b680253210ff31763fd33002e24b4ddacfe989b83ab22b6f3c8d42 +size 56128981 diff --git a/1D/K562_CAGE/ENCFF623BZZ_1.bam b/1D/K562_CAGE/ENCFF623BZZ_1.bam new file mode 100644 index 0000000000000000000000000000000000000000..d073e76ad2a1add6c34438571fb125ba8c16c650 --- /dev/null +++ b/1D/K562_CAGE/ENCFF623BZZ_1.bam @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:daa864abbf0a3e3413d9fbf967ab3a17f569f573cee5b14ef9ba0e6da5a1ae58 +size 1010410957 diff --git a/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr1.h5 b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr1.h5 new file mode 100644 index 0000000000000000000000000000000000000000..ba950f2499dab3a60dbe66dcd67921ba5911e842 --- /dev/null +++ b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr1.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:fc0921cafdfbb89c0e9a555914ea68dbdc41cace4358b136669da4d6bd40b959 +size 101748 diff --git a/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr10.h5 b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr10.h5 new file mode 100644 index 0000000000000000000000000000000000000000..ac184186a697a16ed3684296971a2d286088c764 --- /dev/null +++ b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr10.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:fbc09a9427c138b6f8873badc3515a67f0d4847f35c201b272ca40f5dad0987c +size 56260 diff --git a/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr11.h5 b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr11.h5 new file mode 100644 index 0000000000000000000000000000000000000000..7cf45dce9a78f11d6ac9cf14a3f1490e47629fb3 --- /dev/null +++ b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr11.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:48931e76d7e37d048038666081eab9aa76c7892566464b88fb11330ce347a2af +size 56050 diff --git a/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr12.h5 b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr12.h5 new file mode 100644 index 0000000000000000000000000000000000000000..42a9deecbf87d8f9a1583fd5438aedfa5c96255a --- /dev/null +++ b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr12.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:5618174bcf8c648aec5a5119e9e0c29228b8a08738565c413d53a2850cd21e7f +size 55588 diff --git a/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr13.h5 b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr13.h5 new file mode 100644 index 0000000000000000000000000000000000000000..1394ce5d74540fc9c021fb5d6904e5d8d97db623 --- /dev/null +++ b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr13.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:3a77e0306004a810879e164b4c00aea26bc02323a9d0f014dfcdee00f9297f6d +size 48114 diff --git a/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr14.h5 b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr14.h5 new file mode 100644 index 0000000000000000000000000000000000000000..0ec25ee76af599a7aa80d5958a8bf8a1c71407d9 --- /dev/null +++ b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr14.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:ad4e556f4ad3ab96a28440036e19757a566068f3b3adfe1550fe089b8fe073e4 +size 44986 diff --git a/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr15.h5 b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr15.h5 new file mode 100644 index 0000000000000000000000000000000000000000..dd3d01ab82ad8e0b840a59bfc871cb8bdb144798 --- /dev/null +++ b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr15.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:c4e739e8efff891af78db6e8553c259bd93e5d6caeae66f431277d8a0f70e089 +size 43060 diff --git a/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr16.h5 b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr16.h5 new file mode 100644 index 0000000000000000000000000000000000000000..7dcceee0a94cb2aaa52d878341296ad11931ea15 --- /dev/null +++ b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr16.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:b1a619f0b83b2ad8c5d76a551a92b86fdfd617a67c59230bb3a1d145368e0ebe +size 38188 diff --git a/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr17.h5 b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr17.h5 new file mode 100644 index 0000000000000000000000000000000000000000..716257e12a9e1fe1b4a8d738f94823aec7ed9662 --- /dev/null +++ b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr17.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:070a879b2267f6fade6aeca36383abcb5eed723f78337a343df117c985fe33ab +size 34526 diff --git a/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr18.h5 b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr18.h5 new file mode 100644 index 0000000000000000000000000000000000000000..da2a2e9523269bb4ada9a3434bea459f50c94a69 --- /dev/null +++ b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr18.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:57b80742fb082e901d70f3f8f985d6450900c842098123f0abe86ff815a6aaa0 +size 33278 diff --git a/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr19.h5 b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr19.h5 new file mode 100644 index 0000000000000000000000000000000000000000..f20b69ef483df2d0dfb92861d928b1f2d2c1938b --- /dev/null +++ b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr19.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:7c56bfa5b7c26d47c8e209bcdfc7fdea44a078973e481b7b34b55bdb2d526077 +size 25698 diff --git a/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr2.h5 b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr2.h5 new file mode 100644 index 0000000000000000000000000000000000000000..d48aee57ed8b90b2cc7c2d4834495e61b7ad9428 --- /dev/null +++ b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr2.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:cd9435d27aeb1b2d0d0655abcf931fb04a3b7862cf99725590e140298d6bd67a +size 99326 diff --git a/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr20.h5 b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr20.h5 new file mode 100644 index 0000000000000000000000000000000000000000..fead3be79d5097fbd673cb0ffe1c1baf4b0c3f8b --- /dev/null +++ b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr20.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:bb4c73a831ebade7781829567632220d8a484d4a4541a5d7ecf4d13a7b892642 +size 27258 diff --git a/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr21.h5 b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr21.h5 new file mode 100644 index 0000000000000000000000000000000000000000..7ca8313a221d2f2349f0b390dd6f2505ae3be08b --- /dev/null +++ b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr21.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:8ad0593fb7b1d5b579def0c00d60d1bfce61af8e7a1c7d278a5f380872cf3f8e +size 21298 diff --git a/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr22.h5 b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr22.h5 new file mode 100644 index 0000000000000000000000000000000000000000..118b10742c6e262a6b847a9f2f5f2766ebc40bad --- /dev/null +++ b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr22.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:7a7af08fb653513a60ca58148be332930cba3fc0bdb3cd30715506b7546ebcea +size 22568 diff --git a/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr3.h5 b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr3.h5 new file mode 100644 index 0000000000000000000000000000000000000000..4cb0ef051d82b3a62a7f178201bf4dd5b2a408bc --- /dev/null +++ b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr3.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:b45871b0cf82f410b8293822f6ed457f866b3476394f74637e36bd5217ce7688 +size 81256 diff --git a/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr4.h5 b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr4.h5 new file mode 100644 index 0000000000000000000000000000000000000000..5b08720f4c58a4a800b94b4750bf4bf81049ee1f --- /dev/null +++ b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr4.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:1477c5c960888f21870f0aed58366e0c942402dce0db28e40473e6e1492d5bc1 +size 78508 diff --git a/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr5.h5 b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr5.h5 new file mode 100644 index 0000000000000000000000000000000000000000..7f7c06c2eecad42c4bebaaba510bac36bb1f1caa --- /dev/null +++ b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr5.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:a600199e9be7658023a9770f5a9c8063258a3b5b5791168f7d78af39b8ca6ee8 +size 74414 diff --git a/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr6.h5 b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr6.h5 new file mode 100644 index 0000000000000000000000000000000000000000..093811189102a2a0d296753fe5e7ce2a9487f8c2 --- /dev/null +++ b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr6.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:0c721d0c691523c58511207890b88c0e6b0e169db8c87c5176473b43c3039c83 +size 70494 diff --git a/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr7.h5 b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr7.h5 new file mode 100644 index 0000000000000000000000000000000000000000..01eea828f865ddc8f0a30c44c4904112f383140a --- /dev/null +++ b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr7.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:99e8dfdeb071c45865c0cf27c89405a6a117d32cbb65351240b9f0d9b151fcbe +size 65702 diff --git a/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr8.h5 b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr8.h5 new file mode 100644 index 0000000000000000000000000000000000000000..0f47e24f8798cfdf80e44a9a80eb809e8398eb1e --- /dev/null +++ b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr8.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:98d3fbed1d631d2af29864bd29f20c38a43fdd7780f7c46837b8a47afffd7370 +size 60592 diff --git a/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr9.h5 b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr9.h5 new file mode 100644 index 0000000000000000000000000000000000000000..e27660659cc86b3c81ac97f6e076db2bc95cb539 --- /dev/null +++ b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chr9.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:6eba0270305a64cf3b45e67683d43986fe7e52a8f9b1c252e1b93042ec8637c7 +size 58532 diff --git a/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chrX.h5 b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chrX.h5 new file mode 100644 index 0000000000000000000000000000000000000000..e958baf38f4ceada485a7911373b62d6884b54e3 --- /dev/null +++ b/1D/K562_CAGE/ENCFF623BZZ_1_RPGC_chrX.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:c0a99187f1958855b19de7781fb4403321cc8f248d31069e4d34ee35fb4dab8e +size 64156 diff --git a/1D/K562_CAGE/ENCFF902UHF.bigWig b/1D/K562_CAGE/ENCFF902UHF.bigWig new file mode 100644 index 0000000000000000000000000000000000000000..61cad1d81a7c49f5be80a0081fb2e1c876eaaf7b --- /dev/null +++ b/1D/K562_CAGE/ENCFF902UHF.bigWig @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:1a9040816d79683cbf269aa979849686166b76c4a1c739bdf535a7d79e37a1da +size 54313662 diff --git a/1D/K562_CAGE/ENCFF902UHF_2.bam b/1D/K562_CAGE/ENCFF902UHF_2.bam new file mode 100644 index 0000000000000000000000000000000000000000..48d6b03e11df3e53f3d2b4a169c78d1a151f8744 --- /dev/null +++ b/1D/K562_CAGE/ENCFF902UHF_2.bam @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:3e7e6d4b673004e3163d1b897c02822380419f61564cd3615e71032abd064062 +size 1059218429 diff --git a/1D/K562_DNase-seq/ENCFF826DJP.bam b/1D/K562_DNase-seq/ENCFF826DJP.bam new file mode 100644 index 0000000000000000000000000000000000000000..a44004ffb11a2668f891855ba74b6241979cfc99 --- /dev/null +++ b/1D/K562_DNase-seq/ENCFF826DJP.bam @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:24f5b08d9ff04e0a07b76945dee142d8272f3be606bab53300a354999501b1af +size 12712274854 diff --git a/1D/K562_DNase-seq/ENCFF826DJP.bigWig b/1D/K562_DNase-seq/ENCFF826DJP.bigWig new file mode 100644 index 0000000000000000000000000000000000000000..65f862d0615fe794d8f5a3d0001483112ec93376 --- /dev/null +++ b/1D/K562_DNase-seq/ENCFF826DJP.bigWig @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:ad601e208d113e9b7ca2681f407319393b80e8346fa1bc89d1be021e5dc151f4 +size 1727818989 diff --git a/1D/K562_H3K27ac/ENCFF010PHG.bigWig b/1D/K562_H3K27ac/ENCFF010PHG.bigWig new file mode 100644 index 0000000000000000000000000000000000000000..ea17bc1bf71f4cab8972133ea10e9a86f51b4be4 --- /dev/null +++ b/1D/K562_H3K27ac/ENCFF010PHG.bigWig @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:01301d68b5453f31f0660b873e93fe69c99ffe89cc12d73cfbb10edce39c6ab0 +size 238413798 diff --git a/1D/K562_H3K27ac/ENCFF070PWH.bam b/1D/K562_H3K27ac/ENCFF070PWH.bam new file mode 100644 index 0000000000000000000000000000000000000000..403e428329b703bcc229a7ccf941ec66384b4b52 --- /dev/null +++ b/1D/K562_H3K27ac/ENCFF070PWH.bam @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:8207c4cf9df6cf30cf3371399e32b1e29e2660e85ed50c998891fb3521cdf70b +size 190976426 diff --git a/1D/K562_H3K27ac/ENCFF384ZZM.bam b/1D/K562_H3K27ac/ENCFF384ZZM.bam new file mode 100644 index 0000000000000000000000000000000000000000..e9dfc61e605134a61e9415c522df6053efb4fb05 --- /dev/null +++ b/1D/K562_H3K27ac/ENCFF384ZZM.bam @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:069eaaa10343083bec246ea1521afd7da74b10fe1380ff810c2a9019ab28ed93 +size 415543935 diff --git a/1D/K562_H3K4me3/.DS_Store b/1D/K562_H3K4me3/.DS_Store new file mode 100644 index 0000000000000000000000000000000000000000..5008ddfcf53c02e82d7eee2e57c38e5672ef89f6 Binary files /dev/null and b/1D/K562_H3K4me3/.DS_Store differ diff --git a/1D/K562_H3K4me3/ENCFF367FNL.bam b/1D/K562_H3K4me3/ENCFF367FNL.bam new file mode 100644 index 0000000000000000000000000000000000000000..555b02d451d655cf255684d6a530f36d6e917ebd --- /dev/null +++ b/1D/K562_H3K4me3/ENCFF367FNL.bam @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:c06c40303e34cba69ca855ddddd2c9fd75c4b30c9bd55062fb5522f8b5ea422d +size 511367123 diff --git a/1D/K562_H3K4me3/ENCFF689TMV.bigWig b/1D/K562_H3K4me3/ENCFF689TMV.bigWig new file mode 100644 index 0000000000000000000000000000000000000000..be5b9413ba197e2a78e10abc712317a24f88fa4b --- /dev/null +++ b/1D/K562_H3K4me3/ENCFF689TMV.bigWig @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:ecebd6002a965848296dd17018b82d72a907da55ae2c475d055e782adb84f8e8 +size 859018451 diff --git a/1D/K562_H3K4me3/ENCFF915MJO.bam b/1D/K562_H3K4me3/ENCFF915MJO.bam new file mode 100644 index 0000000000000000000000000000000000000000..11d7d72a889f11a9db85025951690fb5b9875ff5 --- /dev/null +++ b/1D/K562_H3K4me3/ENCFF915MJO.bam @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:64947201eaf5d5bb81e4b3505dacef6effe6127a294702258fe36f0a6d074f6d +size 555307076 diff --git a/1D/K562_JUND_TF_ChIP-seq/ENCFF709JGL.bigWig b/1D/K562_JUND_TF_ChIP-seq/ENCFF709JGL.bigWig new file mode 100644 index 0000000000000000000000000000000000000000..3c4f5bd01b44fc36a1405778394286f156f9befb --- /dev/null +++ b/1D/K562_JUND_TF_ChIP-seq/ENCFF709JGL.bigWig @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:45e73b905832c75577705af82a8dc08c5e0d800d4912d8334202949e69204d06 +size 660230961