GeneExp / promo_enhan_inter /download_EPInformer_training_data.sh
Xingyu Su
EPInformer
72c73fe
biosample DHS ATAC H3K27ac default_accessibility_feature HiC_file HiC_type HiC_resolution alt_TSS alt_genes
GM12878 https://www.encodeproject.org/files/ENCFF467CXY/@@download/ENCFF467CXY.bam https://www.encodeproject.org/files/ENCFF645BAL/@@download/ENCFF645BAL.bam https://www.encodeproject.org/files/ENCFF318GOM/@@download/ENCFF318GOM.hic hic 5000
HUVEC https://www.encodeproject.org/files/ENCFF309JXB/@@download/ENCFF309JXB.bam https://www.encodeproject.org/files/ENCFF735TGN/@@download/ENCFF735TGN.bam https://data.4dnucleome.org/files-processed/4DNFIAWVDQ8C/@@download/4DNFIAWVDQ8C.hic hic 5000
HepG2 https://www.encodeproject.org/files/ENCFF878RGP/@@download/ENCFF878RGP.bam https://www.encodeproject.org/files/ENCFF490KFG/@@download/ENCFF490KFG.bam https://data.4dnucleome.org/files-processed/4DNFICSTCJQZ/@@download/4DNFICSTCJQZ.hic hic 5000
NHEK https://www.encodeproject.org/files/ENCFF474YKG/@@download/ENCFF474YKG.bam https://www.encodeproject.org/files/ENCFF660FOQ/@@download/ENCFF660FOQ.bam https://data.4dnucleome.org/files-processed/4DNFIL9M97T2/@@download/4DNFIL9M97T2.hic hic 5000
A549 https://www.encodeproject.org/files/ENCFF553VCG/@@download/ENCFF553VCG.bam https://www.encodeproject.org/files/ENCFF971VUD/@@download/ENCFF971VUD.bam https://data.4dnucleome.org/files-processed/4DNFID68JQY9/@@download/4DNFID68JQY9.hic hic 5000
K562