In 1998 they moved to , and began work-ups for their next cruise. During the 1998-1999 deployment, VF-213 was the first squadron to fire an AIM-54C Phoenix with the aircrew on night vision goggles. Two months into the deployment, VF-213 participated in Operation Desert Fox, which was the Navy's largest combat evolution since the Gulf War. This successful deployment included the longest combat line period in over 25 years. F-14Ds from VF-213, as well as the rest of the embarked carrier air wing aboard USS "Carl Vinson", joined other US air assets in the final strikes of that operation. Highlights of the cruise included the execution of 19 strikes, dropping 20 laser-guided bombs, supporting 11 combined strikes, flying 70 missions, and logging 230 combat sorties, including 45 reconnaissance missions imaging more than 580 targets.