Yee has three children from his first marriage to Donna Fone, whom he divorced in 2002 after twenty-four years of marriage. He married former model Colleen Saidman, one of his students, in December 2006. Since dating students violates the precepts of yoga teacher conduct as defined by the Yoga Alliance, this led to division in Yee-oriented communities. They live in The Hamptons. Both yoga instructors continue to pursue their own careers (Yee with YeeYoga and Gaiam; Saidman with Yoga Shanti) and in May, 2008 opened an online yoga club / virtual yoga studio together called The Gaiam Yoga Club. Yee now teaches around the world at workshops, retreats, and conferences.