Further success saw Wroxham win the League Cup and Norfolk Senior Cup in 1999–2000, the Norfolk Senior Cup in 2001–02, 2003–04 and 2007–08, and the Eastern Counties League Premier Division title in 2006–07. In 2009–10 the club reached the final of the FA Vase, but lost 6–1 to holders Whitley Bay. In 2011–12 they won the Premier Division for the eighth time this time taking promotion to the North Division of the Isthmian League. Although the club finished in the relegation zone in 2013–14, they were reprieved from relegation when Worksop Town resigned from the Northern Premier League. The club finished in the relegation zone again in 2015–16, but were again reprieved. However, they finished second-from-bottom of the division the following season and were relegated back to the Eastern Counties League Premier Division.