In April 2005, Brown was named to succeed Elizabeth Hoffman, as the president of the University of Colorado on an interim basis. Brown took office on August 1, 2005. Upon taking this role, he inherited a system weakened by sharply decreasing state appropriations, and scandals that included allegations of misuse of foundation funds, instances of sexual assault by members of the football team, waning public confidence, and sharp criticism in the state newspapers. He was later praised for the effective remedies he implemented for aggressively attacking these issues.