Following the battle, Prime began to experience subconscious urgings, leading both the Autobots and the Decepticons to the Arctic Circle. When they arrived, Shockwave was there to arrest them as war criminals. Shockwave had succeeded in ending the war on Cybertron, but Prime soon fell in with a rebel Autobot group that had discovered Shockwave had greater agenda. Rallying Transformers across Cybertron to the cause, Prime faced Shockwave, but was defeated and had the Matrix ripped from him and used to activate Vector Sigma. Before Shockwave could make full use of the mega computers data, however, Ultra Magnus, Prime's brother, arrived and bested him. The injuries Prime took during this conflict necessitated a prolonged restoration period in stasis, but Dreamwave's closure meant that Prime never appeared in their pages again.