The team continued to use Majerle as a starter during the 1999–2000 season, as he started in 69 of 82 games and again averaged 7 points during the season. In the playoffs, Miami defeated the Detroit Pistons in the first round before facing the Knicks in another 7 game series in which New York again prevailed. Majerle averaged 9 points in the playoffs and led the team with 20 three-point field goals. In the 2000 offseason it was revealed that Alonzo Mourning would not play as a result of a kidney disease, and the 2000–01 season would feature new acquisitions such as Eddie Jones and Anthony Mason, and Majerle would serve as a reserve. The Heat would lose in the first round of the playoffs in a sweep to the Charlotte Hornets, and in the offseason Majerle would sign a deal returning to his original team in Phoenix.