At the start of the second season, J.R. is mentoring John Ross in business and dirty tricks and they are plotting to take control of Ewing Energies. J.R. also plots against his old rival Cliff Barnes and his daughter Pamela Rebecca Barnes, who is pregnant with Christopher's twins and is having an affair with John Ross. Bobby asks for J.R.'s help to take down Harris Ryland when it's revealed Ryland kidnapped Bobby's stepdaughter Emma and let Bobby's wife Ann think her daughter was dead. J.R. assures Bobby that he will take Ryland down. In the episode "The Furious and the Fast", J.R. talks to John Ross by phone about a "master plan" to defeat Cliff Barnes and Harris Ryland and to help John Ross take control of Ewing Energies, saying it will be his "masterpiece" when somebody apparently walks into the room and shoots twice, killing him.