At the 2009 FIFA Club World Cup, Atlante defeated Auckland City 3–0 at the quarter-final stage. For its next stop at semifinals, it faced Barcelona in a curious match featuring two Mexicans with the same name, Rafael Márquez Álvarez of Barcelona and Rafael Márquez Lugo of Atlante, and two teams with the same jersey colors. FIFA eventually ruled out Barcelona to play with the blue-and-red stripes over Atlante. Atlante led the match at the fourth minute, but the final score was a 3–1 defeat. For the third-place match, Atlante was defeated by Pohang Steelers in a penalty shootout, missing two of their four shots, and finishing in fourth place.