At the 2009 NCAA Championships, Kupets became national all-around champion for a record-tying third time, earning a 10 on beam and defeating runner-up Kristina Baskett of Utah with a total score of 39.800. The next night, she helped Georgia win its fifth consecutive and tenth overall NCAA championship, posting a career-best 39.900. She scored perfect 10s on the uneven bars and vault, bringing her season total to seven and her career total to eight. In the individual event finals, she won the bars and beam titles (beating fellow Gym Dog and 2004 Olympic teammate Courtney McCool on beam), tied to win floor, and placed third on vault, setting an NCAA record of nine individual titles to end her college career.