Cyanothece the process of fixing nitrogen became unfavorable, and natural selection eliminated some of the necessary genes for the nitrogenase protein complex to increase evolutionary fitness. Cyanobacteria turn energy from the sun into chemical energy through oxygenic photosynthesis. Their light-harvesting complex that captures the photons usually includes the pigments chlorophyll a and phycocyanin. A cyanobacterium’s typical blue-green color is a result of the combination of these two pigments. Three "Cyanothece" strains, sp. PCC 7424, 7822 and 8801, have the additional pigment phycoerythrin, which expands the wavelengths of light these species use for energy. Phycoerythrin also gives these three species a brownish-green
Carotenoid especially reds and purples, are due to other classes of chemicals. Carotenoids serve two key roles in plants and algae: they absorb light energy for use in photosynthesis, and they protect chlorophyll from photodamage. Carotenoids that contain unsubstituted beta-ionone rings (including beta-carotene, alpha-carotene, beta-cryptoxanthin and gamma-carotene) have vitamin A activity (meaning that they can be converted to retinol), and these and other carotenoids can also act as antioxidants. In the eye, lutein, meso-zeaxanthin, and zeaxanthin are present as macular pigments whose importance in visual function remains under clinical research in 2017. The basic building blocks of carotenoids are isopentenyl diphosphate