Polyculture chemicals into the environment such as eutrophication of fresh water or the presence of excess atmospheric nitrogen are greatly reduced in polycultures. Other negative impacts of modern agriculture are similarly reduced. Excessive tillage occurs in most modern agricultural practices, but removes essential microbes and nutrients from the soil that are conserved in polycultures, especially permacultures. Agricultural machinery not only uses fossil fuels and creates waste, but is more costly to farmers. Because polyculture relies on natural systems of crop maintenance these costs can be eliminated as well. Modern agriculture is also dependent on a very limited number of plant species.
Eutrophication for around one third of the ocean's external (non-recycled) nitrogen supply, and up to 3% of the annual new marine biological production. It has been suggested that accumulating reactive nitrogen in the environment may prove as serious as putting carbon dioxide in the atmosphere. Terrestrial ecosystems are subject to similarly adverse impacts from eutrophication. Increased nitrates in soil are frequently undesirable for plants. Many terrestrial plant species are endangered as a result of soil eutrophication, such as the majority of orchid species in Europe. Meadows, forests, and bogs are characterized by low nutrient content and slowly growing species adapted to