Solid angle orientation formula_9, and distance from the viewer as: where the surface area of a sphere is . The solid angle of a cone with its apex at the apex of the solid angle, and with apex angle 2, is the area of a spherical cap on a unit sphere For small such that , this reduces to the area of a circle . The above is found by computing the following double integral using the unit surface element in spherical coordinates: This formula can also be derived without the use of calculus. Over 2200 years ago Archimedes proved that the
Volume Area Dihedral Angle Reporter is calculated by dividing a given residue’s observed accessible surface areas by the calculated accessible surface areas for that residue in an extended Gly-Xaa-Gly tripeptide (where Xaa is the residue of interest). VADAR reports accessible surface are values both for the entire amino acid residue and for the amino acid side chains. The accessible surface areas is also calculated for charged atoms (N, O), polar (N, O, S) atoms and for non-polar atoms (C). This information can be used to calculate charged, polar and non-polar surface area. Accessible surface areas measurements/estimates are particularly useful in protein structure assessment, protein structure