Solid angle surface area of a spherical cap is always equal to the area of a circle whose radius equals the distance from the rim of the spherical cap to the point where the cap's axis of symmetry intersects the cap. In the diagram this radius is given as: Hence for a unit sphere the solid angle of the spherical cap is given as: When = , the spherical cap becomes a hemisphere having a solid angle 2. The solid angle of the complement of the cone (picture a melon with the cone cut out) is clearly: This is also the solid
Volume Area Dihedral Angle Reporter is calculated by dividing a given residue’s observed accessible surface areas by the calculated accessible surface areas for that residue in an extended Gly-Xaa-Gly tripeptide (where Xaa is the residue of interest). VADAR reports accessible surface are values both for the entire amino acid residue and for the amino acid side chains. The accessible surface areas is also calculated for charged atoms (N, O), polar (N, O, S) atoms and for non-polar atoms (C). This information can be used to calculate charged, polar and non-polar surface area. Accessible surface areas measurements/estimates are particularly useful in protein structure assessment, protein structure