Square root any nonnegative number, then the principal square root of −"x" is The right side (as well as its negative) is indeed a square root of −"x", since For every non-zero complex number "z" there exist precisely two numbers "w" such that : the principal square root of "z" (defined below), and its negative. There are two complex numbers that square to a given arbitrary non-zero imaginary number formula_11 with real formula_12 where the two-digit pattern {3, 6} repeats over and over again in the partial denominators. Since , the above is also identical to the following generalized continued fractions: The
Root-mean-square deviation of atomic positions Root-mean-square deviation of atomic positions In bioinformatics, the root-mean-square deviation of atomic positions (or simply root-mean-square deviation, RMSD) is the measure of the average distance between the atoms (usually the backbone atoms) of superimposed proteins. Note that RMSD calculation can be applied to other, non-protein molecules, such as small organic molecules. In the study of globular protein conformations, one customarily measures the similarity in three-dimensional structure by the RMSD of the Cα atomic coordinates after optimal rigid body superposition. When a dynamical system fluctuates about some well-defined average position, the RMSD from the average over time can be referred to