Greater scaup faces numerous threats, the most significant challenge to their survival is habitat degradation caused by a mix of human development and runoff. Greater scaup, when moulting and during the winter, are threatened by escalated levels of organochloride contaminants. Oil and sewage pollution also threaten this duck. Since 80% of the greater scaup population winters in the urbanized part of the Atlantic Flyway, these ducks are subject to high levels of organic contaminates, along with increased levels of heavy metals in foods and habitat. A joint group of American and Canadian scientists researching scaup migration across the Great Lakes found that
Greater scaup Isles, western Norway, the southern tip of Sweden, the coast from Brittany to Poland, including all of Denmark, the Alps, the eastern Adriatic Sea, the northern and western Black sea and the southwestern Caspian Sea. In North America, the greater scaup summers in Newfoundland and Labrador, Ungava Bay, Hudson Bay, Lake Winnipeg, northern Yukon, northern Manitoba, and northern Saskatchewan. It winters along the coasts of North America from northern British Columbia south to the Baja Peninsula and from Nova Scotia and New Brunswick south to Florida, as well as the shores of the Great Lakes and the Gulf of Mexico.