Confederate Army of the Shenandoah Harpers Ferry, Virginia (modern day West Virginia). To organize and train the companies, Virginia state commander Robert E. Lee initially appointed Thomas J. Jackson to command the post. Jackson formed five regiments of infantry and a battery of artillery from the various companies, forming the basis of the Stonewall Brigade. On May 15, Joseph E. Johnston replaced Jackson as commander of Harpers Ferry and continued to receive additional regiments from throughout the Confederacy. He would eventually have four brigades of infantry and an independent regiment of cavalry, the 1st Virginia Cavalry commanded by J. E. B. Stuart. In mid-June, forces
Army of Northern Virginia Lee corresponded with Joseph E. Johnston, his predecessor in army command, prior to that date and referred to Johnston's command as the Army of Northern Virginia. Part of the confusion results from the fact that Johnston commanded the Department of Northern Virginia (as of October 22, 1861) and the name Army of Northern Virginia can be seen as an informal consequence of its parent department's name. Jefferson Davis and Johnston did not adopt the name, but it is clear that the organization of units as of March 14 was the same organization that Lee received on June 1, and thus