Origin of the domestic dog matched across Eurasia and its branch is phylogenetically rooted in the same sequence as the Altai dog (not a direct ancestor). The subclade d2 hybrid haplotypes are found in 2.6% of South-West Asian dogs. Haplogroup E: Derived from post-domestication wolf–dog hybridization in East Asia, (rare distribution in South-East Asia, Korea and Japan). Haplogroup F: Derived from post-domestication wolf–dog hybridization in Japan. A study of 600 dog specimens found only one dog whose sequence indicated hybridization with the extinct Japanese wolf. It is not known whether this hybridization was the result of humans selecting for phenotypic traits from local wolf populations
Origin of the domestic dog could not be found in other dogs nor wolves today. As the taxonomic classification of the "proto-dog" Paleolithic dogs as being either dogs or wolves remains controversial, they were excluded from the study. The phylogenetic tree generated from mDNA sequences found a deep division between the Sarloos wolfdog and all other dogs, indicating that breed's recent deriving from the German Shepherd and captive gray wolves. The next largest division was between Eastern Asian dogs and Western Eurasian (Europe and the Middle East) dogs that had occurred between 14,000-6,400 YBP, with the Newgrange dog clustering with the Western Eurasian dogs. The