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Best Answer: A little mucus in stool is normal. My son had the same problems. It turned out to be a mild allergy to dogs. What happens, is because babies are too young to blow their nose, they end up swallowing a lot of mucus, and it doesn't all digest. Thus a mucus diaper. They do look like what comes out of your nose.he doctor noticed he had mucus in his stool. I watched what I eat then started eliminating some items and we are having an allergy test next week. The doctor said that if it is negative we need to see a specialist. The thing is I am not sure that what I see is mucus.
1 doctor agreed: Mucus with stool: Mucus discharge occurs in up to 50% of patients with irritable bowel syndrome, with or without pain. Mucus may also be produced in response to partial obstruction, chronic constipation, rectal dysfunction, infection, ; even from secretory villous tumors of the rectum.