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Best Answer: A little mucus in stool is normal. My son had the same problems. It turned out to be a mild allergy to dogs. What happens, is because babies are too young to blow their nose, they end up swallowing a lot of mucus, and it doesn't all digest. Thus a mucus diaper. They do look like what comes out of your nose.he doctor noticed he had mucus in his stool. I watched what I eat then started eliminating some items and we are having an allergy test next week. The doctor said that if it is negative we need to see a specialist. The thing is I am not sure that what I see is mucus.
Mucus in the stool is a sign of irritable bowel syndrome. I THINK it may also be a sign of Crohn's disease. However, if you're having a massive allergy attack to pollen/weed/seed/mold/whatever, your body may also overproduce mucus for that reason, too. If you aren't bleeding, and you aren't in excruciating agony, you can probably futz around with your diet and see if any of that helps.