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1 The eukaryotic DNA is organized in one or more linear molecules, called chromosomes, which are associated with histone proteins. 2  All chromosomal DNA is stored in the cell nucleus, separated from the cytoplasm by a membrane. 3  Some eukaryotic organelles such as mitochondria also contain some DNA. Some eukaryotic cells (plant cells and fungal cells) also have a cell wall. 2  Inside the cell is the cytoplasmic region that contains the genome (DNA), ribosomes and various sorts of inclusions. 3  The genetic material is freely found in the cytoplasm.
Confidence votes 7.7K. Most of the DNA in a eukaryotic cell is in the nucleus, and that is where DNA replication and transcription occur. In eukaryotic cells, mitochondria and chloroplasts also contain DNA, which performs replication and transcription inside these organelles. In prokaryotic cells there is no nucleus.The DNA is in a region of the cytoplasm called the nucleoid, and that is where DNA replication and transcription occur in these cells.ost of the DNA in a eukaryotic cell is in the nucleus, and that is where DNA replication and transcription occur.