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1 If the liver is unable to break down the ammonia it is excreted in the urine.  Other diseases - Other common causes of the ammonia smell in urine are diabetes, metabolic disorders, sexually transmitted diseases, medications, vitamins, and nutritional supplements.
Ammonia can be a weak acid or a weak base, depending on what type of chemical it is suspended in. Ammonia has a strong, pungent odor that is easily recognizable in cleaning products, cat urine, and, for some people, sweat! The key to ammonia in urine and sweat is the nitrogen. The only macronutrient in your body that contains nitrogen is amino acids, the building blocks of protein. In fact, many bodybuilders are always seeking a positive nitrogen balance meaning that less nitrogen leaves their body than enters their body.