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The hypothalamus is a portion of the brain near the third ventricle, located below the thalamus and above the brainstem. The anterior boundary of the hypothalamus is determined by the line connecting the anterior commissure, the lamina terminalis and the optic chiasm.
Picture above obtained from [ref1] The amygdala of the human brain is placed somewhat strategically at dorsomedial part (above and inside) of temporal lobe, anteriorly (in front) of the hippocampus and close to the tail of the caudate nucleus. It is placed quite near to the the hypothalamus and also the brainstem. Picture below shows the diagrammatic representation of amygdalaâs location and structure. (image obtained from [ref2]). This almond like structure, ranging from 1-4cm , average about 1.8cm, has extensive connection with the brain.