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Polygenic traits are traits determined by the combined effect of more than one pair of genes. Human stature is an example of this trait. The size of all body parts from head to foot combined determines height. The size of each individual body part are determined by numerous genes.
Multiple alleles are the existence of more than two alleles(versions of the gene) for a genetic traits. So multiple alleles are more than two alleles for one trait, andpolygenic traits are one trait that is influenced by mulitplegenes.