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A: The enzymes that break down protein include trypsin, chymotrypsin, pepsin, thermolysin, glutamyl endopeptidase, elastase, bromelain and papain. Trypsin, pepsin, elastase, thermolysin, glutamyl, endopeptidase and chymotrypsin are made in the human body. Bromelain comes from pineapples and papain comes from papayas.
A protein digestive enzyme will not digest a fat; a fat enzyme will not digest a starch (carbohydrate). Each enzyme has a specific function in the body; this is referred to enzyme specificity. Enzymes act upon chemicals and change them into other chemicals, but enzymes themselves remain unchanged.rotease breaks down protein, amylase breaks down carbohydrate and starch, and lipase breaks down fat. These three enzymes break down the majority of the common food groups. Other enzymes include lactase (breaks down lactose-dairy), maltase & sucrase (break down food sugars), and cellulase (break down cellulose).