Educational video describing the anatomy of the tensor fasciae latae muscle. Become a friend on facebook: http://www.facebook.com/drebraheim. Follow me on twitter: https://twitter.com/#!/DrEbraheim_UTMC. 1  Education. 2  Standard YouTube License.
The specific cause of body aches (myalgia) are the interleukins, which are primarily produced by the macrophages. These interleukins cause pain, body aches, hypersensitivity of the nerves, etc. Some of the interleukins (such as IL-2) cause the fever seen during the flu, and probably the headaches. Since these interleukins are produced in response many different kinds of bacterial and viral infections, symptoms such as fever, myalgia, and headaches can be seen in infections by many different etiologic agents.
At some point after this painful event has started, your headache occurs and that is the reason it feels like the neck pain caused the headache. The pain in your neck happens because you get migraines and not the other way around. However, because the neck pain precedes the actual migraine headache pain (two separate types of pain) it feels like the neck pain has caused the migraine.