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A kidney infection happens when bacteria infects your kidneys. The bacteria are usually a type called E. coli, which live in your bowel.The bacteria get in through the opening of the urethra and move upwards through your urinary tract, first infecting your bladder and then your kidneys.n rare cases, a kidney infection can develop if bacteria or fungi infect the skin and the infection spreads through your bloodstream into your kidney. However, this type of infection usually only occurs in people with weakened immune systems.
A man is eating a meal with a glass of cranberry juice. Photo Credit-lvinst-/iStock/Getty Images. Kidney infections usually occur as part of a urinary tract infection, or UTI. Kidney infections happen when germs and bacteria remain in the urinary tract instead of being washed away by urination and showering.hoto Credit-lvinst-/iStock/Getty Images. Kidney infections usually occur as part of a urinary tract infection, or UTI. Kidney infections happen when germs and bacteria remain in the urinary tract instead of being washed away by urination and showering.