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Further pathogens of urinary tract infections: 1  Anaerobic Gram-positive pathogens: Peptococcus and Peptostreptococcus. 2  Neisseria gonorrhoeae. 3  Mycobacterium tuberculosis. 4  Fungi, most commonly Candida species (total 5% of UTI), and Aspergillus.
In terms of specific bacteria, E. coli. (Escherichia coli) is by far the most common organism responsible for bladder infection or cystitis. Staph organisms (from skin) and other gut bacteria (Proteus, Klebsiella, Enterococcus) are other bacteria that can cause cystitis and other forms of urinary infections.