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Definition of Antimicrobial peptides. Antimicrobial peptides (AMPs), also called host defense peptides (HDPs) are part of the innate immune response found among all classes of life. Fundamental differences exist between prokaryotic and eukaryotic cells that may represent targets for antimicrobial peptides.
3D Structure of Antimicrobial Peptides 1. Structure annotation The information on the three-dimensional (3D) structure of antimicrobial peptides is annotated in this database from the first version of the APD (Wang & Wang, 2004).It includes methods for structural determination, structural class, structural regions, critical residues, and the type of membrane-mimetic environments.. Structural statistics of antimicrobial peptides A list of antimicrobial peptdes with a defined 3D structure can be obtained by searching the APD database. The statistics of a variety of structures is also provided in this database. Go to the Statistic Interface.