Griffith used two strains of "Streptococcus pneumoniae". He then uses the bacteria to infect the mice, which have many similar characteristics to humans. He used a type III-S (smooth) and type II-R (rough) strain. The III-S strain covers itself with a polysaccharide capsule that protects it from the host's immune system. This means that the host will die. The II-R strain does not have that protective shield around it and is killed by the host's immune system.