title: Problems using a package in conda
body: <p>I am new to using Linux/coding etc. and I've been installing packages using conda and most have been fine. I installed Medaka using</p>
  <p><code>conda create -n medaka -c conda-forge -c bioconda medaka</code></p>
  <p>But if I try and execute it says 'command not found'</p>
  <p>I know the medaka environment is there, but if I list what's in conda, it's not there as a package (even though if I physically look in the folder it exists. I tried reinstalling, but can't because the environment exists and tried updating but get an error:</p>
  <blockquote>
  <p>PackageNotInstalledError: Package is not installed in prefix</p>
  </blockquote>
  <p>I also can't seem to remove or delete the environment. It seems a bit of a catch 22! If anyone could help I'd be most appreciative!</p>